Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm21811-201ENSMUST00000096485 930 ntBASIC10.6□□□□□ -0.71
Scrt1Q99M85 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Scrt1Q99M85 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC10.6□□□□□ -0.71
Scrt1Q99M85 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Scrt1Q99M85 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Scrt1Q99M85 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Scrt1Q99M85 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Scrt1Q99M85 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Scrt1Q99M85 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Scrt1Q99M85 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Scrt1Q99M85 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Scrt1Q99M85 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Scrt1Q99M85 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Scrt1Q99M85 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Scrt1Q99M85 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Scrt1Q99M85 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Scrt1Q99M85 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Scrt1Q99M85 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Scrt1Q99M85 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Scrt1Q99M85 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Scrt1Q99M85 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC10.59□□□□□ -0.71
Scrt1Q99M85 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scrt1Q99M85 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scrt1Q99M85 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scrt1Q99M85 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scrt1Q99M85 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Scrt1Q99M85 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Scrt1Q99M85 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Scrt1Q99M85 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Scrt1Q99M85 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Scrt1Q99M85 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scrt1Q99M85 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scrt1Q99M85 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Scrt1Q99M85 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Scrt1Q99M85 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC10.59□□□□□ -0.71
Scrt1Q99M85 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC10.59□□□□□ -0.71
Scrt1Q99M85 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scrt1Q99M85 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Scrt1Q99M85 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scrt1Q99M85 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scrt1Q99M85 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scrt1Q99M85 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Scrt1Q99M85 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC10.59□□□□□ -0.71
Scrt1Q99M85 Gm12501-201ENSMUST00000119163 529 ntBASIC10.59□□□□□ -0.71
Scrt1Q99M85 Gm11340-201ENSMUST00000119226 412 ntBASIC10.59□□□□□ -0.71
Scrt1Q99M85 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Scrt1Q99M85 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Scrt1Q99M85 Gm25881-201ENSMUST00000157783 103 ntBASIC10.59□□□□□ -0.71
Scrt1Q99M85 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC10.59□□□□□ -0.71
Scrt1Q99M85 Rn7s6-201ENSMUST00000175005 291 ntBASIC10.59□□□□□ -0.71
Scrt1Q99M85 Gm5733-201ENSMUST00000190232 939 ntBASIC10.59□□□□□ -0.71
Scrt1Q99M85 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Scrt1Q99M85 CT009713.8-202ENSMUST00000224732 385 ntBASIC10.59□□□□□ -0.71
Scrt1Q99M85 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scrt1Q99M85 Ginm1-202ENSMUST00000065124 300 ntBASIC10.59□□□□□ -0.71
Scrt1Q99M85 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scrt1Q99M85 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scrt1Q99M85 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scrt1Q99M85 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scrt1Q99M85 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scrt1Q99M85 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scrt1Q99M85 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scrt1Q99M85 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scrt1Q99M85 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.59□□□□□ -0.71
Scrt1Q99M85 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scrt1Q99M85 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scrt1Q99M85 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scrt1Q99M85 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Scrt1Q99M85 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scrt1Q99M85 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scrt1Q99M85 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC10.59□□□□□ -0.71
Scrt1Q99M85 Gm43045-201ENSMUST00000198725 2095 ntBASIC10.59□□□□□ -0.71
Scrt1Q99M85 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scrt1Q99M85 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scrt1Q99M85 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scrt1Q99M85 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scrt1Q99M85 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scrt1Q99M85 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Scrt1Q99M85 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Scrt1Q99M85 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Scrt1Q99M85 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Scrt1Q99M85 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Scrt1Q99M85 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Scrt1Q99M85 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Scrt1Q99M85 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Scrt1Q99M85 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Scrt1Q99M85 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Scrt1Q99M85 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Scrt1Q99M85 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Scrt1Q99M85 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Scrt1Q99M85 Gm7851-201ENSMUST00000117574 323 ntBASIC10.58□□□□□ -0.72
Scrt1Q99M85 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Scrt1Q99M85 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC10.58□□□□□ -0.72
Scrt1Q99M85 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Scrt1Q99M85 Gm25951-201ENSMUST00000175330 64 ntBASIC10.58□□□□□ -0.72
Scrt1Q99M85 Gm9230-201ENSMUST00000188228 532 ntBASIC10.58□□□□□ -0.72
Scrt1Q99M85 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC10.58□□□□□ -0.72
Scrt1Q99M85 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC10.58□□□□□ -0.72
Scrt1Q99M85 Gm34023-201ENSMUST00000195539 217 ntBASIC10.58□□□□□ -0.72
Scrt1Q99M85 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms