Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga3Q91XY5 Gm45342-201ENSMUST00000210903 1363 ntBASIC10.77□□□□□ -0.68
Pcdhga3Q91XY5 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Pcdhga3Q91XY5 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Pcdhga3Q91XY5 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Pcdhga3Q91XY5 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Pcdhga3Q91XY5 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Pcdhga3Q91XY5 Cog3-203ENSMUST00000227473 4197 ntBASIC10.77□□□□□ -0.68
Pcdhga3Q91XY5 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Pcdhga3Q91XY5 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.68
Pcdhga3Q91XY5 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdhga3Q91XY5 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdhga3Q91XY5 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdhga3Q91XY5 Gm19221-201ENSMUST00000221827 1477 ntBASIC10.77□□□□□ -0.69
Pcdhga3Q91XY5 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdhga3Q91XY5 Gm9083-201ENSMUST00000120423 819 ntBASIC10.77□□□□□ -0.69
Pcdhga3Q91XY5 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC10.77□□□□□ -0.69
Pcdhga3Q91XY5 Gm13570-201ENSMUST00000140763 309 ntBASIC10.77□□□□□ -0.69
Pcdhga3Q91XY5 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.77□□□□□ -0.69
Pcdhga3Q91XY5 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdhga3Q91XY5 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC10.77□□□□□ -0.69
Pcdhga3Q91XY5 Gm23119-201ENSMUST00000158610 140 ntBASIC10.77□□□□□ -0.69
Pcdhga3Q91XY5 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC10.77□□□□□ -0.69
Pcdhga3Q91XY5 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC10.77□□□□□ -0.69
Pcdhga3Q91XY5 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC10.77□□□□□ -0.69
Pcdhga3Q91XY5 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdhga3Q91XY5 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.77□□□□□ -0.69
Pcdhga3Q91XY5 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
Pcdhga3Q91XY5 Gm37489-201ENSMUST00000191883 159 ntBASIC10.77□□□□□ -0.69
Pcdhga3Q91XY5 Gm19963-201ENSMUST00000208413 1255 ntBASIC10.77□□□□□ -0.69
Pcdhga3Q91XY5 Gm39404-201ENSMUST00000216350 313 ntBASIC10.77□□□□□ -0.69
Pcdhga3Q91XY5 Gm7046-201ENSMUST00000221351 977 ntBASIC10.77□□□□□ -0.69
Pcdhga3Q91XY5 Gm8227-201ENSMUST00000223306 571 ntBASIC10.77□□□□□ -0.69
Pcdhga3Q91XY5 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdhga3Q91XY5 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdhga3Q91XY5 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC10.77□□□□□ -0.69
Pcdhga3Q91XY5 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdhga3Q91XY5 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdhga3Q91XY5 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdhga3Q91XY5 Gm17244-201ENSMUST00000192482 3416 ntBASIC10.77□□□□□ -0.69
Pcdhga3Q91XY5 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdhga3Q91XY5 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdhga3Q91XY5 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.69
Pcdhga3Q91XY5 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdhga3Q91XY5 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
Pcdhga3Q91XY5 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdhga3Q91XY5 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdhga3Q91XY5 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdhga3Q91XY5 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.77□□□□□ -0.69
Pcdhga3Q91XY5 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdhga3Q91XY5 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdhga3Q91XY5 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdhga3Q91XY5 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdhga3Q91XY5 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdhga3Q91XY5 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdhga3Q91XY5 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Pcdhga3Q91XY5 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 AC157950.1-201ENSMUST00000217561 2168 ntBASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Gm13875-201ENSMUST00000120162 282 ntBASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Gm8801-201ENSMUST00000173255 1064 ntBASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Gm29396-201ENSMUST00000185659 716 ntBASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Gm10608-202ENSMUST00000213924 676 ntBASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 AC153974.2-201ENSMUST00000218577 1025 ntBASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Morn2-202ENSMUST00000227729 656 ntBASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Gm9823-201ENSMUST00000051212 327 ntBASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdhga3Q91XY5 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms