Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trex1Q91XB0 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trex1Q91XB0 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trex1Q91XB0 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC13.74□□□□□ -0.21
Trex1Q91XB0 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trex1Q91XB0 Gm16166-201ENSMUST00000118291 787 ntBASIC13.74□□□□□ -0.21
Trex1Q91XB0 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC13.74□□□□□ -0.21
Trex1Q91XB0 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC13.74□□□□□ -0.21
Trex1Q91XB0 Gm22138-201ENSMUST00000158748 128 ntBASIC13.74□□□□□ -0.21
Trex1Q91XB0 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC13.74□□□□□ -0.21
Trex1Q91XB0 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC13.74□□□□□ -0.21
Trex1Q91XB0 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trex1Q91XB0 Ighv5-11-201ENSMUST00000193354 371 ntBASIC13.74□□□□□ -0.21
Trex1Q91XB0 Gm9645-201ENSMUST00000197131 792 ntBASIC13.74□□□□□ -0.21
Trex1Q91XB0 Gm43520-201ENSMUST00000197996 164 ntBASIC13.74□□□□□ -0.21
Trex1Q91XB0 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC13.74□□□□□ -0.21
Trex1Q91XB0 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC13.74□□□□□ -0.21
Trex1Q91XB0 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC13.74□□□□□ -0.21
Trex1Q91XB0 AC115122.1-201ENSMUST00000224850 1040 ntBASIC13.74□□□□□ -0.21
Trex1Q91XB0 Gm6430-201ENSMUST00000054664 1248 ntBASIC13.74□□□□□ -0.21
Trex1Q91XB0 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trex1Q91XB0 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trex1Q91XB0 Cog3-203ENSMUST00000227473 4197 ntBASIC13.74□□□□□ -0.21
Trex1Q91XB0 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.74□□□□□ -0.21
Trex1Q91XB0 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trex1Q91XB0 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trex1Q91XB0 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Trex1Q91XB0 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trex1Q91XB0 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trex1Q91XB0 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trex1Q91XB0 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trex1Q91XB0 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trex1Q91XB0 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trex1Q91XB0 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trex1Q91XB0 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trex1Q91XB0 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trex1Q91XB0 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trex1Q91XB0 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trex1Q91XB0 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trex1Q91XB0 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trex1Q91XB0 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trex1Q91XB0 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trex1Q91XB0 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trex1Q91XB0 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trex1Q91XB0 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trex1Q91XB0 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trex1Q91XB0 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trex1Q91XB0 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trex1Q91XB0 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC13.73□□□□□ -0.21
Trex1Q91XB0 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trex1Q91XB0 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trex1Q91XB0 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trex1Q91XB0 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trex1Q91XB0 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trex1Q91XB0 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC13.73□□□□□ -0.21
Trex1Q91XB0 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trex1Q91XB0 Gm8194-201ENSMUST00000159783 859 ntBASIC13.73□□□□□ -0.21
Trex1Q91XB0 Gm21092-201ENSMUST00000178995 955 ntBASIC13.73□□□□□ -0.21
Trex1Q91XB0 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC13.73□□□□□ -0.21
Trex1Q91XB0 Gm12407-201ENSMUST00000180219 324 ntBASIC13.73□□□□□ -0.21
Trex1Q91XB0 Gm6450-201ENSMUST00000200896 574 ntBASIC13.73□□□□□ -0.21
Trex1Q91XB0 Gm44124-201ENSMUST00000204159 472 ntBASIC13.73□□□□□ -0.21
Trex1Q91XB0 Gm45113-201ENSMUST00000207518 165 ntBASIC13.73□□□□□ -0.21
Trex1Q91XB0 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trex1Q91XB0 AC112945.1-201ENSMUST00000226413 514 ntBASIC13.73□□□□□ -0.21
Trex1Q91XB0 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trex1Q91XB0 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trex1Q91XB0 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trex1Q91XB0 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trex1Q91XB0 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trex1Q91XB0 Gm18198-201ENSMUST00000204986 1551 ntBASIC13.73□□□□□ -0.21
Trex1Q91XB0 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trex1Q91XB0 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC13.73□□□□□ -0.21
Trex1Q91XB0 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trex1Q91XB0 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trex1Q91XB0 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trex1Q91XB0 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.73□□□□□ -0.21
Trex1Q91XB0 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trex1Q91XB0 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Trex1Q91XB0 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trex1Q91XB0 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.73□□□□□ -0.21
Trex1Q91XB0 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trex1Q91XB0 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trex1Q91XB0 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trex1Q91XB0 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC13.72□□□□□ -0.21
Trex1Q91XB0 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC13.72□□□□□ -0.21
Trex1Q91XB0 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trex1Q91XB0 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trex1Q91XB0 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trex1Q91XB0 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trex1Q91XB0 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trex1Q91XB0 CT009489.1-201ENSMUST00000227740 1893 ntBASIC13.72□□□□□ -0.21
Trex1Q91XB0 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trex1Q91XB0 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trex1Q91XB0 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trex1Q91XB0 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trex1Q91XB0 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.72□□□□□ -0.21
Trex1Q91XB0 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trex1Q91XB0 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.72□□□□□ -0.21
Trex1Q91XB0 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms