Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc9Q8VC31 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc9Q8VC31 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc9Q8VC31 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Ccdc9Q8VC31 Gm26865-201ENSMUST00000180970 3284 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc9Q8VC31 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc9Q8VC31 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc9Q8VC31 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc9Q8VC31 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Ccdc9Q8VC31 Gm45428-201ENSMUST00000209619 1789 ntBASIC14.47□□□□□ -0.09
Ccdc9Q8VC31 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Ccdc9Q8VC31 Gm45597-201ENSMUST00000211524 1994 ntBASIC14.47□□□□□ -0.09
Ccdc9Q8VC31 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc9Q8VC31 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Ccdc9Q8VC31 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.47□□□□□ -0.09
Ccdc9Q8VC31 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.47□□□□□ -0.09
Ccdc9Q8VC31 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc9Q8VC31 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Ccdc9Q8VC31 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc9Q8VC31 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc9Q8VC31 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Ccdc9Q8VC31 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc9Q8VC31 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.47□□□□□ -0.09
Ccdc9Q8VC31 Gm13385-201ENSMUST00000121089 220 ntBASIC14.47□□□□□ -0.09
Ccdc9Q8VC31 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC14.47□□□□□ -0.09
Ccdc9Q8VC31 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc9Q8VC31 Gm8927-201ENSMUST00000181978 981 ntBASIC14.47□□□□□ -0.09
Ccdc9Q8VC31 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.47□□□□□ -0.09
Ccdc9Q8VC31 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc9Q8VC31 Gm3222-201ENSMUST00000071282 990 ntBASIC14.47□□□□□ -0.09
Ccdc9Q8VC31 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC14.47□□□□□ -0.09
Ccdc9Q8VC31 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc9Q8VC31 Dopey2-207ENSMUST00000227156 7340 ntBASIC14.47□□□□□ -0.09
Ccdc9Q8VC31 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc9Q8VC31 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc9Q8VC31 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Ccdc9Q8VC31 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc9Q8VC31 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc9Q8VC31 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc9Q8VC31 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc9Q8VC31 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc9Q8VC31 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc9Q8VC31 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc9Q8VC31 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc9Q8VC31 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc9Q8VC31 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc9Q8VC31 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc9Q8VC31 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC14.46□□□□□ -0.09
Ccdc9Q8VC31 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc9Q8VC31 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc9Q8VC31 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc9Q8VC31 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.46□□□□□ -0.09
Ccdc9Q8VC31 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Ccdc9Q8VC31 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.46□□□□□ -0.09
Ccdc9Q8VC31 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC14.46□□□□□ -0.09
Ccdc9Q8VC31 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc9Q8VC31 Gm27838-201ENSMUST00000184829 128 ntBASIC14.46□□□□□ -0.09
Ccdc9Q8VC31 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Ccdc9Q8VC31 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.46□□□□□ -0.09
Ccdc9Q8VC31 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Ccdc9Q8VC31 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc9Q8VC31 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Ccdc9Q8VC31 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc9Q8VC31 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Ccdc9Q8VC31 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Ccdc9Q8VC31 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc9Q8VC31 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc9Q8VC31 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Ccdc9Q8VC31 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.46□□□□□ -0.1
Ccdc9Q8VC31 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc9Q8VC31 Myom2-201ENSMUST00000033842 5075 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc9Q8VC31 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc9Q8VC31 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc9Q8VC31 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc9Q8VC31 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc9Q8VC31 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc9Q8VC31 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc9Q8VC31 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc9Q8VC31 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc9Q8VC31 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc9Q8VC31 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Ccdc9Q8VC31 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc9Q8VC31 Gm42971-201ENSMUST00000199228 2079 ntBASIC14.45□□□□□ -0.1
Ccdc9Q8VC31 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc9Q8VC31 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc9Q8VC31 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc9Q8VC31 Grb10-202ENSMUST00000109653 2048 ntTSL 5 BASIC14.45□□□□□ -0.1
Ccdc9Q8VC31 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.45□□□□□ -0.1
Ccdc9Q8VC31 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.45□□□□□ -0.1
Ccdc9Q8VC31 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc9Q8VC31 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc9Q8VC31 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc9Q8VC31 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc9Q8VC31 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc9Q8VC31 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Ccdc9Q8VC31 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc9Q8VC31 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc9Q8VC31 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc9Q8VC31 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc9Q8VC31 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms