Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nup35Q8R4R6 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Nup35Q8R4R6 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nup35Q8R4R6 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC9.79□□□□□ -0.84
Nup35Q8R4R6 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Nup35Q8R4R6 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nup35Q8R4R6 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nup35Q8R4R6 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nup35Q8R4R6 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Nup35Q8R4R6 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nup35Q8R4R6 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nup35Q8R4R6 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nup35Q8R4R6 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Nup35Q8R4R6 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Nup35Q8R4R6 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Nup35Q8R4R6 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nup35Q8R4R6 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nup35Q8R4R6 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Nup35Q8R4R6 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Nup35Q8R4R6 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Nup35Q8R4R6 AC167022.1-201ENSMUST00000218647 1458 ntBASIC9.79□□□□□ -0.84
Nup35Q8R4R6 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Mup-ps23-201ENSMUST00000118063 630 ntBASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Gm11439-201ENSMUST00000118598 409 ntBASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Gm24644-201ENSMUST00000157114 139 ntBASIC9.78□□□□□ -0.84
Nup35Q8R4R6 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Gm45384-201ENSMUST00000210451 277 ntBASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 CT030657.3-201ENSMUST00000222707 1200 ntBASIC9.78□□□□□ -0.84
Nup35Q8R4R6 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Gm5356-201ENSMUST00000093326 615 ntBASIC9.78□□□□□ -0.84
Nup35Q8R4R6 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Gm9115-201ENSMUST00000120192 1348 ntBASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nup35Q8R4R6 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Nup35Q8R4R6 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Nup35Q8R4R6 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Nup35Q8R4R6 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Nup35Q8R4R6 Gm21136-201ENSMUST00000186812 2575 ntBASIC9.77□□□□□ -0.84
Nup35Q8R4R6 Gm6605-201ENSMUST00000031488 2574 ntBASIC9.77□□□□□ -0.84
Nup35Q8R4R6 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Nup35Q8R4R6 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Nup35Q8R4R6 Gm44152-201ENSMUST00000205007 1691 ntBASIC9.77□□□□□ -0.84
Nup35Q8R4R6 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Nup35Q8R4R6 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.84
Nup35Q8R4R6 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.84
Nup35Q8R4R6 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 AC122291.1-201ENSMUST00000228937 5748 ntBASIC9.77□□□□□ -0.85
Nup35Q8R4R6 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms