Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC13.58□□□□□ -0.24
Syne4Q8CII8 Gm5451-201ENSMUST00000080545 579 ntBASIC13.58□□□□□ -0.24
Syne4Q8CII8 Olfr584-201ENSMUST00000098210 964 ntBASIC13.58□□□□□ -0.24
Syne4Q8CII8 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Syne4Q8CII8 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Syne4Q8CII8 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Syne4Q8CII8 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Syne4Q8CII8 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Syne4Q8CII8 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Syne4Q8CII8 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Syne4Q8CII8 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC13.58□□□□□ -0.24
Syne4Q8CII8 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Syne4Q8CII8 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.58□□□□□ -0.24
Syne4Q8CII8 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Syne4Q8CII8 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Syne4Q8CII8 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Syne4Q8CII8 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Syne4Q8CII8 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC13.57□□□□□ -0.24
Syne4Q8CII8 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Syne4Q8CII8 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.57□□□□□ -0.24
Syne4Q8CII8 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Syne4Q8CII8 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.57□□□□□ -0.24
Syne4Q8CII8 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Syne4Q8CII8 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Syne4Q8CII8 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Syne4Q8CII8 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.57□□□□□ -0.24
Syne4Q8CII8 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Syne4Q8CII8 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Syne4Q8CII8 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Syne4Q8CII8 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Syne4Q8CII8 Gm26134-201ENSMUST00000178484 110 ntBASIC13.57□□□□□ -0.24
Syne4Q8CII8 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC13.57□□□□□ -0.24
Syne4Q8CII8 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC13.57□□□□□ -0.24
Syne4Q8CII8 Gm6450-201ENSMUST00000200896 574 ntBASIC13.57□□□□□ -0.24
Syne4Q8CII8 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC13.57□□□□□ -0.24
Syne4Q8CII8 Gm45410-201ENSMUST00000211331 1093 ntBASIC13.57□□□□□ -0.24
Syne4Q8CII8 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Syne4Q8CII8 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Syne4Q8CII8 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Syne4Q8CII8 Gm5805-201ENSMUST00000072779 456 ntBASIC13.57□□□□□ -0.24
Syne4Q8CII8 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Syne4Q8CII8 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Syne4Q8CII8 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Syne4Q8CII8 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Syne4Q8CII8 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Syne4Q8CII8 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Syne4Q8CII8 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Syne4Q8CII8 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Syne4Q8CII8 Gm6655-201ENSMUST00000201932 1309 ntBASIC13.57□□□□□ -0.24
Syne4Q8CII8 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Syne4Q8CII8 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Syne4Q8CII8 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Syne4Q8CII8 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Syne4Q8CII8 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Syne4Q8CII8 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.57□□□□□ -0.24
Syne4Q8CII8 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Syne4Q8CII8 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Syne4Q8CII8 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Syne4Q8CII8 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC13.56□□□□□ -0.24
Syne4Q8CII8 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Syne4Q8CII8 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Syne4Q8CII8 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Syne4Q8CII8 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Syne4Q8CII8 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Syne4Q8CII8 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Syne4Q8CII8 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.56□□□□□ -0.24
Syne4Q8CII8 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Syne4Q8CII8 Gm29100-201ENSMUST00000187564 4410 ntBASIC13.56□□□□□ -0.24
Syne4Q8CII8 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Syne4Q8CII8 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Syne4Q8CII8 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Syne4Q8CII8 Gm43447-201ENSMUST00000198471 1535 ntBASIC13.56□□□□□ -0.24
Syne4Q8CII8 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Syne4Q8CII8 Gm12030-201ENSMUST00000121917 223 ntBASIC13.56□□□□□ -0.24
Syne4Q8CII8 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Syne4Q8CII8 Gm20392-201ENSMUST00000173047 701 ntBASIC13.56□□□□□ -0.24
Syne4Q8CII8 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC13.56□□□□□ -0.24
Syne4Q8CII8 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Syne4Q8CII8 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Syne4Q8CII8 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Syne4Q8CII8 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Syne4Q8CII8 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
Syne4Q8CII8 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.56□□□□□ -0.24
Syne4Q8CII8 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Syne4Q8CII8 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Syne4Q8CII8 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Syne4Q8CII8 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Syne4Q8CII8 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Syne4Q8CII8 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Syne4Q8CII8 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Syne4Q8CII8 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Syne4Q8CII8 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Syne4Q8CII8 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Syne4Q8CII8 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Syne4Q8CII8 Gm37348-201ENSMUST00000193104 1789 ntBASIC13.55□□□□□ -0.24
Syne4Q8CII8 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Syne4Q8CII8 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Syne4Q8CII8 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Syne4Q8CII8 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Syne4Q8CII8 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms