Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Gm7553-201ENSMUST00000185805 1426 ntBASIC10.77□□□□□ -0.68
Lysmd4Q8CC84 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.77□□□□□ -0.69
Lysmd4Q8CC84 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Lysmd4Q8CC84 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Lysmd4Q8CC84 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
Lysmd4Q8CC84 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Lysmd4Q8CC84 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Lysmd4Q8CC84 Gm8706-201ENSMUST00000197372 1491 ntBASIC10.77□□□□□ -0.69
Lysmd4Q8CC84 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Lysmd4Q8CC84 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Lysmd4Q8CC84 Gm12138-201ENSMUST00000122180 951 ntBASIC10.77□□□□□ -0.69
Lysmd4Q8CC84 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.77□□□□□ -0.69
Lysmd4Q8CC84 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Lysmd4Q8CC84 Gm43002-201ENSMUST00000200310 155 ntBASIC10.77□□□□□ -0.69
Lysmd4Q8CC84 Gm18584-201ENSMUST00000203098 964 ntBASIC10.77□□□□□ -0.69
Lysmd4Q8CC84 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC10.77□□□□□ -0.69
Lysmd4Q8CC84 Gm5904-201ENSMUST00000210286 865 ntBASIC10.77□□□□□ -0.69
Lysmd4Q8CC84 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Lysmd4Q8CC84 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC10.77□□□□□ -0.69
Lysmd4Q8CC84 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Lysmd4Q8CC84 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Lysmd4Q8CC84 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Lysmd4Q8CC84 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Lysmd4Q8CC84 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Lysmd4Q8CC84 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Lysmd4Q8CC84 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Lysmd4Q8CC84 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
Lysmd4Q8CC84 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Lysmd4Q8CC84 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
Lysmd4Q8CC84 Gm43931-201ENSMUST00000204817 2870 ntBASIC10.77□□□□□ -0.69
Lysmd4Q8CC84 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Lysmd4Q8CC84 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Lysmd4Q8CC84 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Lysmd4Q8CC84 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Lysmd4Q8CC84 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Lysmd4Q8CC84 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Lysmd4Q8CC84 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Lysmd4Q8CC84 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Lysmd4Q8CC84 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Lysmd4Q8CC84 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC10.77□□□□□ -0.69
Lysmd4Q8CC84 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Lysmd4Q8CC84 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Lysmd4Q8CC84 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
Lysmd4Q8CC84 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 Gm13142-201ENSMUST00000117213 1453 ntBASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 Gm38292-201ENSMUST00000192646 3045 ntBASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 Gm8738-201ENSMUST00000172606 329 ntBASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 Gm29649-201ENSMUST00000185649 419 ntBASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 Gm44711-201ENSMUST00000205414 1264 ntBASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 Gm17931-201ENSMUST00000208132 634 ntBASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Lysmd4Q8CC84 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Lysmd4Q8CC84 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Lysmd4Q8CC84 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.75□□□□□ -0.69
Lysmd4Q8CC84 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Lysmd4Q8CC84 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC10.75□□□□□ -0.69
Lysmd4Q8CC84 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms