Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 AC164702.1-201ENSMUST00000220135 2212 ntBASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Gm28071-201ENSMUST00000190355 478 ntBASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp44Q8C2S0 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp44Q8C2S0 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp44Q8C2S0 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
Usp44Q8C2S0 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC14.04□□□□□ -0.16
Usp44Q8C2S0 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Usp44Q8C2S0 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp44Q8C2S0 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp44Q8C2S0 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp44Q8C2S0 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp44Q8C2S0 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC14.04□□□□□ -0.16
Usp44Q8C2S0 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp44Q8C2S0 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Usp44Q8C2S0 Gm14017-201ENSMUST00000121934 386 ntBASIC14.04□□□□□ -0.16
Usp44Q8C2S0 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC14.04□□□□□ -0.16
Usp44Q8C2S0 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC14.04□□□□□ -0.16
Usp44Q8C2S0 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Usp44Q8C2S0 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC14.04□□□□□ -0.16
Usp44Q8C2S0 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC14.04□□□□□ -0.16
Usp44Q8C2S0 Cd63-ps-202ENSMUST00000154992 717 ntBASIC14.04□□□□□ -0.16
Usp44Q8C2S0 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC14.04□□□□□ -0.16
Usp44Q8C2S0 Gm4310-201ENSMUST00000177847 889 ntBASIC14.04□□□□□ -0.16
Usp44Q8C2S0 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Usp44Q8C2S0 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp44Q8C2S0 Gm18038-201ENSMUST00000197900 485 ntBASIC14.04□□□□□ -0.16
Usp44Q8C2S0 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC14.04□□□□□ -0.16
Usp44Q8C2S0 AC093022.1-201ENSMUST00000226949 1072 ntBASIC14.04□□□□□ -0.16
Usp44Q8C2S0 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp44Q8C2S0 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp44Q8C2S0 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp44Q8C2S0 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC14.04□□□□□ -0.16
Usp44Q8C2S0 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp44Q8C2S0 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp44Q8C2S0 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp44Q8C2S0 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp44Q8C2S0 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp44Q8C2S0 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp44Q8C2S0 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Usp44Q8C2S0 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Usp44Q8C2S0 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp44Q8C2S0 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Usp44Q8C2S0 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp44Q8C2S0 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp44Q8C2S0 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp44Q8C2S0 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC14.03□□□□□ -0.16
Usp44Q8C2S0 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp44Q8C2S0 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp44Q8C2S0 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp44Q8C2S0 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp44Q8C2S0 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp44Q8C2S0 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms