Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm22993-201ENSMUST00000175423 254 ntBASIC13.37□□□□□ -0.27
Trim47Q8C0E3 Gm27390-201ENSMUST00000184516 176 ntBASIC13.37□□□□□ -0.27
Trim47Q8C0E3 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC13.37□□□□□ -0.27
Trim47Q8C0E3 Gm3332-201ENSMUST00000189337 928 ntBASIC13.37□□□□□ -0.27
Trim47Q8C0E3 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC13.37□□□□□ -0.27
Trim47Q8C0E3 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim47Q8C0E3 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trim47Q8C0E3 Gm8155-201ENSMUST00000216363 1612 ntBASIC13.37□□□□□ -0.27
Trim47Q8C0E3 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Trim47Q8C0E3 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim47Q8C0E3 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim47Q8C0E3 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.37□□□□□ -0.27
Trim47Q8C0E3 Gm9072-201ENSMUST00000218390 1514 ntBASIC13.37□□□□□ -0.27
Trim47Q8C0E3 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim47Q8C0E3 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim47Q8C0E3 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim47Q8C0E3 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim47Q8C0E3 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim47Q8C0E3 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim47Q8C0E3 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trim47Q8C0E3 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim47Q8C0E3 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim47Q8C0E3 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim47Q8C0E3 Gm13812-201ENSMUST00000118061 1347 ntBASIC13.37□□□□□ -0.27
Trim47Q8C0E3 Gm13810-201ENSMUST00000118584 1347 ntBASIC13.37□□□□□ -0.27
Trim47Q8C0E3 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim47Q8C0E3 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Trim47Q8C0E3 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trim47Q8C0E3 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim47Q8C0E3 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim47Q8C0E3 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim47Q8C0E3 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim47Q8C0E3 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim47Q8C0E3 Gm43868-201ENSMUST00000205187 2114 ntBASIC13.36□□□□□ -0.27
Trim47Q8C0E3 Gm9796-201ENSMUST00000062249 2250 ntBASIC13.36□□□□□ -0.27
Trim47Q8C0E3 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim47Q8C0E3 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trim47Q8C0E3 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC13.36□□□□□ -0.27
Trim47Q8C0E3 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC13.36□□□□□ -0.27
Trim47Q8C0E3 Gm15610-201ENSMUST00000120584 195 ntBASIC13.36□□□□□ -0.27
Trim47Q8C0E3 Gm8343-201ENSMUST00000182705 994 ntBASIC13.36□□□□□ -0.27
Trim47Q8C0E3 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim47Q8C0E3 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trim47Q8C0E3 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim47Q8C0E3 Gm42629-201ENSMUST00000199063 1102 ntBASIC13.36□□□□□ -0.27
Trim47Q8C0E3 Gm8956-201ENSMUST00000203939 825 ntBASIC13.36□□□□□ -0.27
Trim47Q8C0E3 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim47Q8C0E3 Gm7848-201ENSMUST00000210739 718 ntBASIC13.36□□□□□ -0.27
Trim47Q8C0E3 Gm4157-201ENSMUST00000211647 679 ntBASIC13.36□□□□□ -0.27
Trim47Q8C0E3 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim47Q8C0E3 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim47Q8C0E3 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim47Q8C0E3 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim47Q8C0E3 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim47Q8C0E3 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim47Q8C0E3 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim47Q8C0E3 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim47Q8C0E3 Gm19692-201ENSMUST00000203856 2084 ntBASIC13.36□□□□□ -0.27
Trim47Q8C0E3 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim47Q8C0E3 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim47Q8C0E3 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Trim47Q8C0E3 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim47Q8C0E3 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Trim47Q8C0E3 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim47Q8C0E3 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim47Q8C0E3 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trim47Q8C0E3 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim47Q8C0E3 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim47Q8C0E3 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim47Q8C0E3 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim47Q8C0E3 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim47Q8C0E3 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim47Q8C0E3 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim47Q8C0E3 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim47Q8C0E3 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim47Q8C0E3 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim47Q8C0E3 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim47Q8C0E3 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim47Q8C0E3 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim47Q8C0E3 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim47Q8C0E3 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim47Q8C0E3 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim47Q8C0E3 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim47Q8C0E3 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC13.35□□□□□ -0.27
Trim47Q8C0E3 Gm15004-201ENSMUST00000119192 630 ntBASIC13.35□□□□□ -0.27
Trim47Q8C0E3 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC13.35□□□□□ -0.27
Trim47Q8C0E3 Gm25881-201ENSMUST00000157783 103 ntBASIC13.35□□□□□ -0.27
Trim47Q8C0E3 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC13.35□□□□□ -0.27
Trim47Q8C0E3 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC13.35□□□□□ -0.27
Trim47Q8C0E3 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC13.35□□□□□ -0.27
Trim47Q8C0E3 Mir6979-201ENSMUST00000183927 56 ntBASIC13.35□□□□□ -0.27
Trim47Q8C0E3 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Trim47Q8C0E3 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC13.35□□□□□ -0.27
Trim47Q8C0E3 Gm17931-201ENSMUST00000208132 634 ntBASIC13.35□□□□□ -0.27
Trim47Q8C0E3 Gm9797-202ENSMUST00000218003 294 ntBASIC13.35□□□□□ -0.27
Trim47Q8C0E3 Gm807-202ENSMUST00000224929 408 ntBASIC13.35□□□□□ -0.27
Trim47Q8C0E3 AC133602.1-201ENSMUST00000227510 509 ntBASIC13.35□□□□□ -0.27
Trim47Q8C0E3 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim47Q8C0E3 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim47Q8C0E3 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms