Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.2□□□□□ -0.46
Sh3rf2Q8BZT2 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sh3rf2Q8BZT2 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sh3rf2Q8BZT2 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sh3rf2Q8BZT2 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sh3rf2Q8BZT2 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sh3rf2Q8BZT2 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sh3rf2Q8BZT2 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sh3rf2Q8BZT2 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.2□□□□□ -0.46
Sh3rf2Q8BZT2 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sh3rf2Q8BZT2 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sh3rf2Q8BZT2 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.2□□□□□ -0.46
Sh3rf2Q8BZT2 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Sh3rf2Q8BZT2 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.19□□□□□ -0.46
Sh3rf2Q8BZT2 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3rf2Q8BZT2 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3rf2Q8BZT2 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3rf2Q8BZT2 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Sh3rf2Q8BZT2 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3rf2Q8BZT2 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3rf2Q8BZT2 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Sh3rf2Q8BZT2 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3rf2Q8BZT2 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3rf2Q8BZT2 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.19□□□□□ -0.46
Sh3rf2Q8BZT2 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3rf2Q8BZT2 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.19□□□□□ -0.46
Sh3rf2Q8BZT2 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Sh3rf2Q8BZT2 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3rf2Q8BZT2 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3rf2Q8BZT2 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.19□□□□□ -0.46
Sh3rf2Q8BZT2 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Sh3rf2Q8BZT2 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Sh3rf2Q8BZT2 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3rf2Q8BZT2 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3rf2Q8BZT2 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Sh3rf2Q8BZT2 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3rf2Q8BZT2 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.19□□□□□ -0.46
Sh3rf2Q8BZT2 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.19□□□□□ -0.46
Sh3rf2Q8BZT2 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Sh3rf2Q8BZT2 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3rf2Q8BZT2 Gm37835-201ENSMUST00000193305 361 ntBASIC12.19□□□□□ -0.46
Sh3rf2Q8BZT2 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.19□□□□□ -0.46
Sh3rf2Q8BZT2 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.19□□□□□ -0.46
Sh3rf2Q8BZT2 Gm5051-201ENSMUST00000204085 485 ntBASIC12.19□□□□□ -0.46
Sh3rf2Q8BZT2 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Sh3rf2Q8BZT2 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3rf2Q8BZT2 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3rf2Q8BZT2 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3rf2Q8BZT2 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Sh3rf2Q8BZT2 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Sh3rf2Q8BZT2 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.19□□□□□ -0.46
Sh3rf2Q8BZT2 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Sh3rf2Q8BZT2 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3rf2Q8BZT2 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.19□□□□□ -0.46
Sh3rf2Q8BZT2 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Sh3rf2Q8BZT2 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3rf2Q8BZT2 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3rf2Q8BZT2 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3rf2Q8BZT2 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3rf2Q8BZT2 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3rf2Q8BZT2 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3rf2Q8BZT2 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3rf2Q8BZT2 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3rf2Q8BZT2 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3rf2Q8BZT2 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3rf2Q8BZT2 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3rf2Q8BZT2 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3rf2Q8BZT2 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3rf2Q8BZT2 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Sh3rf2Q8BZT2 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.18□□□□□ -0.46
Sh3rf2Q8BZT2 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3rf2Q8BZT2 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Sh3rf2Q8BZT2 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3rf2Q8BZT2 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.18□□□□□ -0.46
Sh3rf2Q8BZT2 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.18□□□□□ -0.46
Sh3rf2Q8BZT2 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Sh3rf2Q8BZT2 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3rf2Q8BZT2 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.18□□□□□ -0.46
Sh3rf2Q8BZT2 Gm44126-201ENSMUST00000204831 514 ntBASIC12.18□□□□□ -0.46
Sh3rf2Q8BZT2 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3rf2Q8BZT2 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.18□□□□□ -0.46
Sh3rf2Q8BZT2 AC166992.1-201ENSMUST00000216356 565 ntBASIC12.18□□□□□ -0.46
Sh3rf2Q8BZT2 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3rf2Q8BZT2 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3rf2Q8BZT2 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.18□□□□□ -0.46
Sh3rf2Q8BZT2 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.18□□□□□ -0.46
Sh3rf2Q8BZT2 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3rf2Q8BZT2 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3rf2Q8BZT2 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3rf2Q8BZT2 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3rf2Q8BZT2 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Sh3rf2Q8BZT2 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3rf2Q8BZT2 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3rf2Q8BZT2 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3rf2Q8BZT2 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sh3rf2Q8BZT2 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms