Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.31□□□□□ -0.44
Nup54Q8BTS4 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Nup54Q8BTS4 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup54Q8BTS4 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup54Q8BTS4 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Nup54Q8BTS4 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup54Q8BTS4 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup54Q8BTS4 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup54Q8BTS4 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nup54Q8BTS4 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup54Q8BTS4 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Nup54Q8BTS4 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.3□□□□□ -0.44
Nup54Q8BTS4 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup54Q8BTS4 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.3□□□□□ -0.44
Nup54Q8BTS4 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup54Q8BTS4 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup54Q8BTS4 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Nup54Q8BTS4 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup54Q8BTS4 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.3□□□□□ -0.44
Nup54Q8BTS4 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.3□□□□□ -0.44
Nup54Q8BTS4 Gm16570-201ENSMUST00000161951 436 ntBASIC12.3□□□□□ -0.44
Nup54Q8BTS4 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.3□□□□□ -0.44
Nup54Q8BTS4 Gm25732-201ENSMUST00000175168 60 ntBASIC12.3□□□□□ -0.44
Nup54Q8BTS4 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nup54Q8BTS4 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.3□□□□□ -0.44
Nup54Q8BTS4 Gm19287-201ENSMUST00000203190 358 ntBASIC12.3□□□□□ -0.44
Nup54Q8BTS4 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.3□□□□□ -0.44
Nup54Q8BTS4 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.3□□□□□ -0.44
Nup54Q8BTS4 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.3□□□□□ -0.44
Nup54Q8BTS4 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup54Q8BTS4 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup54Q8BTS4 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nup54Q8BTS4 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup54Q8BTS4 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup54Q8BTS4 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup54Q8BTS4 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup54Q8BTS4 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup54Q8BTS4 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup54Q8BTS4 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.3□□□□□ -0.44
Nup54Q8BTS4 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.3□□□□□ -0.44
Nup54Q8BTS4 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nup54Q8BTS4 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Nup54Q8BTS4 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup54Q8BTS4 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup54Q8BTS4 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup54Q8BTS4 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup54Q8BTS4 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup54Q8BTS4 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.3□□□□□ -0.44
Nup54Q8BTS4 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup54Q8BTS4 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup54Q8BTS4 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Nup54Q8BTS4 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup54Q8BTS4 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Nup54Q8BTS4 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nup54Q8BTS4 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup54Q8BTS4 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Nup54Q8BTS4 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup54Q8BTS4 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nup54Q8BTS4 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup54Q8BTS4 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup54Q8BTS4 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup54Q8BTS4 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nup54Q8BTS4 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Nup54Q8BTS4 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup54Q8BTS4 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Nup54Q8BTS4 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup54Q8BTS4 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Nup54Q8BTS4 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.44
Nup54Q8BTS4 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup54Q8BTS4 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Nup54Q8BTS4 Gm12857-201ENSMUST00000117678 592 ntBASIC12.29□□□□□ -0.44
Nup54Q8BTS4 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.29□□□□□ -0.44
Nup54Q8BTS4 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.29□□□□□ -0.44
Nup54Q8BTS4 Gm25881-201ENSMUST00000157783 103 ntBASIC12.29□□□□□ -0.44
Nup54Q8BTS4 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nup54Q8BTS4 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.29□□□□□ -0.44
Nup54Q8BTS4 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.29□□□□□ -0.44
Nup54Q8BTS4 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.29□□□□□ -0.44
Nup54Q8BTS4 Gm9136-201ENSMUST00000193368 454 ntBASIC12.29□□□□□ -0.44
Nup54Q8BTS4 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.29□□□□□ -0.44
Nup54Q8BTS4 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.29□□□□□ -0.44
Nup54Q8BTS4 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Nup54Q8BTS4 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup54Q8BTS4 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup54Q8BTS4 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nup54Q8BTS4 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nup54Q8BTS4 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup54Q8BTS4 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nup54Q8BTS4 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Nup54Q8BTS4 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nup54Q8BTS4 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nup54Q8BTS4 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup54Q8BTS4 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nup54Q8BTS4 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.29□□□□□ -0.44
Nup54Q8BTS4 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup54Q8BTS4 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.28□□□□□ -0.44
Nup54Q8BTS4 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup54Q8BTS4 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.28□□□□□ -0.44
Nup54Q8BTS4 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.28□□□□□ -0.44
Nup54Q8BTS4 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms