Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rd3Q8BRE0 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rd3Q8BRE0 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rd3Q8BRE0 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rd3Q8BRE0 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rd3Q8BRE0 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Rd3Q8BRE0 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rd3Q8BRE0 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rd3Q8BRE0 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rd3Q8BRE0 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rd3Q8BRE0 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rd3Q8BRE0 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rd3Q8BRE0 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rd3Q8BRE0 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rd3Q8BRE0 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.76□□□□□ -0.37
Rd3Q8BRE0 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC12.76□□□□□ -0.37
Rd3Q8BRE0 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC12.76□□□□□ -0.37
Rd3Q8BRE0 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rd3Q8BRE0 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.76□□□□□ -0.37
Rd3Q8BRE0 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.76□□□□□ -0.37
Rd3Q8BRE0 Gm45398-201ENSMUST00000210561 165 ntBASIC12.76□□□□□ -0.37
Rd3Q8BRE0 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
Rd3Q8BRE0 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.76□□□□□ -0.37
Rd3Q8BRE0 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rd3Q8BRE0 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rd3Q8BRE0 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rd3Q8BRE0 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.76□□□□□ -0.37
Rd3Q8BRE0 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Rd3Q8BRE0 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.76□□□□□ -0.37
Rd3Q8BRE0 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rd3Q8BRE0 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Rd3Q8BRE0 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rd3Q8BRE0 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rd3Q8BRE0 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rd3Q8BRE0 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rd3Q8BRE0 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rd3Q8BRE0 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Rd3Q8BRE0 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rd3Q8BRE0 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rd3Q8BRE0 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rd3Q8BRE0 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rd3Q8BRE0 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.75□□□□□ -0.37
Rd3Q8BRE0 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Rd3Q8BRE0 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rd3Q8BRE0 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rd3Q8BRE0 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rd3Q8BRE0 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rd3Q8BRE0 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Rd3Q8BRE0 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rd3Q8BRE0 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.75□□□□□ -0.37
Rd3Q8BRE0 Gm5419-201ENSMUST00000119301 527 ntBASIC12.75□□□□□ -0.37
Rd3Q8BRE0 Gm15566-201ENSMUST00000121130 590 ntBASIC12.75□□□□□ -0.37
Rd3Q8BRE0 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rd3Q8BRE0 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rd3Q8BRE0 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rd3Q8BRE0 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC12.75□□□□□ -0.37
Rd3Q8BRE0 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.75□□□□□ -0.37
Rd3Q8BRE0 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.75□□□□□ -0.37
Rd3Q8BRE0 Gm5778-201ENSMUST00000171003 1072 ntBASIC12.75□□□□□ -0.37
Rd3Q8BRE0 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC12.75□□□□□ -0.37
Rd3Q8BRE0 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.75□□□□□ -0.37
Rd3Q8BRE0 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.75□□□□□ -0.37
Rd3Q8BRE0 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.75□□□□□ -0.37
Rd3Q8BRE0 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rd3Q8BRE0 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rd3Q8BRE0 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Rd3Q8BRE0 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rd3Q8BRE0 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rd3Q8BRE0 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rd3Q8BRE0 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rd3Q8BRE0 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rd3Q8BRE0 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rd3Q8BRE0 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rd3Q8BRE0 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Rd3Q8BRE0 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rd3Q8BRE0 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rd3Q8BRE0 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rd3Q8BRE0 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rd3Q8BRE0 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rd3Q8BRE0 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.74□□□□□ -0.37
Rd3Q8BRE0 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rd3Q8BRE0 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rd3Q8BRE0 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rd3Q8BRE0 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rd3Q8BRE0 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rd3Q8BRE0 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.74□□□□□ -0.37
Rd3Q8BRE0 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.74□□□□□ -0.37
Rd3Q8BRE0 Gm14247-201ENSMUST00000120950 237 ntBASIC12.74□□□□□ -0.37
Rd3Q8BRE0 Gm11660-201ENSMUST00000120955 412 ntBASIC12.74□□□□□ -0.37
Rd3Q8BRE0 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC12.74□□□□□ -0.37
Rd3Q8BRE0 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rd3Q8BRE0 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rd3Q8BRE0 Gm18893-201ENSMUST00000198416 943 ntBASIC12.74□□□□□ -0.37
Rd3Q8BRE0 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rd3Q8BRE0 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.74□□□□□ -0.37
Rd3Q8BRE0 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rd3Q8BRE0 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Rd3Q8BRE0 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rd3Q8BRE0 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.74□□□□□ -0.37
Rd3Q8BRE0 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms