Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2bQ8BJF9 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2bQ8BJF9 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2bQ8BJF9 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.34□□□□□ -0.43
Chmp2bQ8BJF9 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.34□□□□□ -0.43
Chmp2bQ8BJF9 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2bQ8BJF9 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2bQ8BJF9 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2bQ8BJF9 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2bQ8BJF9 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2bQ8BJF9 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2bQ8BJF9 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2bQ8BJF9 AC122291.1-201ENSMUST00000228937 5748 ntBASIC12.34□□□□□ -0.43
Chmp2bQ8BJF9 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Chmp2bQ8BJF9 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.34□□□□□ -0.43
Chmp2bQ8BJF9 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2bQ8BJF9 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.34□□□□□ -0.43
Chmp2bQ8BJF9 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2bQ8BJF9 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2bQ8BJF9 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.34□□□□□ -0.43
Chmp2bQ8BJF9 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.34□□□□□ -0.43
Chmp2bQ8BJF9 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.34□□□□□ -0.43
Chmp2bQ8BJF9 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.34□□□□□ -0.43
Chmp2bQ8BJF9 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2bQ8BJF9 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC12.34□□□□□ -0.43
Chmp2bQ8BJF9 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2bQ8BJF9 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2bQ8BJF9 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2bQ8BJF9 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2bQ8BJF9 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Chmp2bQ8BJF9 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2bQ8BJF9 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2bQ8BJF9 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2bQ8BJF9 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2bQ8BJF9 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2bQ8BJF9 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2bQ8BJF9 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2bQ8BJF9 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.34□□□□□ -0.43
Chmp2bQ8BJF9 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chmp2bQ8BJF9 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2bQ8BJF9 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Chmp2bQ8BJF9 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2bQ8BJF9 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Chmp2bQ8BJF9 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Chmp2bQ8BJF9 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2bQ8BJF9 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Chmp2bQ8BJF9 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2bQ8BJF9 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.33□□□□□ -0.44
Chmp2bQ8BJF9 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2bQ8BJF9 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.33□□□□□ -0.44
Chmp2bQ8BJF9 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2bQ8BJF9 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2bQ8BJF9 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
Chmp2bQ8BJF9 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2bQ8BJF9 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2bQ8BJF9 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.33□□□□□ -0.44
Chmp2bQ8BJF9 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.33□□□□□ -0.44
Chmp2bQ8BJF9 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.33□□□□□ -0.44
Chmp2bQ8BJF9 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.33□□□□□ -0.44
Chmp2bQ8BJF9 Gm37201-201ENSMUST00000191845 523 ntBASIC12.33□□□□□ -0.44
Chmp2bQ8BJF9 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Chmp2bQ8BJF9 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.33□□□□□ -0.44
Chmp2bQ8BJF9 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.33□□□□□ -0.44
Chmp2bQ8BJF9 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2bQ8BJF9 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2bQ8BJF9 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2bQ8BJF9 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2bQ8BJF9 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2bQ8BJF9 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2bQ8BJF9 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2bQ8BJF9 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2bQ8BJF9 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Chmp2bQ8BJF9 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2bQ8BJF9 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.33□□□□□ -0.44
Chmp2bQ8BJF9 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2bQ8BJF9 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2bQ8BJF9 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2bQ8BJF9 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Chmp2bQ8BJF9 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Gm24934-201ENSMUST00000103764 111 ntBASIC12.32□□□□□ -0.44
Chmp2bQ8BJF9 Gm13875-201ENSMUST00000120162 282 ntBASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms