Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Gm14999-201ENSMUST00000121039 624 ntBASIC11.65□□□□□ -0.54
Rnf38Q8BI21 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf38Q8BI21 Gm16379-201ENSMUST00000161469 348 ntBASIC11.65□□□□□ -0.54
Rnf38Q8BI21 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf38Q8BI21 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.65□□□□□ -0.54
Rnf38Q8BI21 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf38Q8BI21 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf38Q8BI21 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.65□□□□□ -0.54
Rnf38Q8BI21 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.65□□□□□ -0.54
Rnf38Q8BI21 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf38Q8BI21 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.65□□□□□ -0.54
Rnf38Q8BI21 Gm37424-201ENSMUST00000191727 561 ntBASIC11.65□□□□□ -0.54
Rnf38Q8BI21 Gm8762-201ENSMUST00000193486 339 ntBASIC11.65□□□□□ -0.54
Rnf38Q8BI21 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.65□□□□□ -0.54
Rnf38Q8BI21 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf38Q8BI21 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf38Q8BI21 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf38Q8BI21 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.65□□□□□ -0.54
Rnf38Q8BI21 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.65□□□□□ -0.54
Rnf38Q8BI21 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.65□□□□□ -0.54
Rnf38Q8BI21 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf38Q8BI21 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf38Q8BI21 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf38Q8BI21 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf38Q8BI21 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf38Q8BI21 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf38Q8BI21 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.65□□□□□ -0.54
Rnf38Q8BI21 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Rnf38Q8BI21 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf38Q8BI21 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.65□□□□□ -0.55
Rnf38Q8BI21 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rnf38Q8BI21 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rnf38Q8BI21 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.65□□□□□ -0.55
Rnf38Q8BI21 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rnf38Q8BI21 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.65□□□□□ -0.55
Rnf38Q8BI21 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.65□□□□□ -0.55
Rnf38Q8BI21 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rnf38Q8BI21 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rnf38Q8BI21 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rnf38Q8BI21 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.65□□□□□ -0.55
Rnf38Q8BI21 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC11.64□□□□□ -0.55
Rnf38Q8BI21 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC11.64□□□□□ -0.55
Rnf38Q8BI21 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf38Q8BI21 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.64□□□□□ -0.55
Rnf38Q8BI21 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf38Q8BI21 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.64□□□□□ -0.55
Rnf38Q8BI21 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf38Q8BI21 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.64□□□□□ -0.55
Rnf38Q8BI21 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf38Q8BI21 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf38Q8BI21 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf38Q8BI21 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.64□□□□□ -0.55
Rnf38Q8BI21 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf38Q8BI21 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf38Q8BI21 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf38Q8BI21 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf38Q8BI21 Gm23931-201ENSMUST00000103842 109 ntBASIC11.64□□□□□ -0.55
Rnf38Q8BI21 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf38Q8BI21 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.64□□□□□ -0.55
Rnf38Q8BI21 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf38Q8BI21 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.64□□□□□ -0.55
Rnf38Q8BI21 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf38Q8BI21 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf38Q8BI21 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.64□□□□□ -0.55
Rnf38Q8BI21 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.64□□□□□ -0.55
Rnf38Q8BI21 Gm5781-201ENSMUST00000219792 443 ntBASIC11.64□□□□□ -0.55
Rnf38Q8BI21 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf38Q8BI21 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf38Q8BI21 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.64□□□□□ -0.55
Rnf38Q8BI21 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf38Q8BI21 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf38Q8BI21 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Rnf38Q8BI21 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf38Q8BI21 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf38Q8BI21 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf38Q8BI21 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf38Q8BI21 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf38Q8BI21 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf38Q8BI21 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf38Q8BI21 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.64□□□□□ -0.55
Rnf38Q8BI21 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf38Q8BI21 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rnf38Q8BI21 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Rnf38Q8BI21 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf38Q8BI21 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf38Q8BI21 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf38Q8BI21 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf38Q8BI21 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf38Q8BI21 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf38Q8BI21 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf38Q8BI21 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Rnf38Q8BI21 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf38Q8BI21 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Rnf38Q8BI21 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf38Q8BI21 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf38Q8BI21 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Rnf38Q8BI21 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf38Q8BI21 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rnf38Q8BI21 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.63□□□□□ -0.55
Rnf38Q8BI21 Gm5187-201ENSMUST00000117317 991 ntBASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms