Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Gm8885-201ENSMUST00000189382 598 ntBASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Gm18753-201ENSMUST00000201000 566 ntBASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Rps4l-202ENSMUST00000204242 789 ntBASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Depdc1bQ8BH88 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Depdc1bQ8BH88 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC13.09□□□□□ -0.31
Depdc1bQ8BH88 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Depdc1bQ8BH88 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Depdc1bQ8BH88 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Depdc1bQ8BH88 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Depdc1bQ8BH88 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Depdc1bQ8BH88 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Depdc1bQ8BH88 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Depdc1bQ8BH88 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Depdc1bQ8BH88 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Depdc1bQ8BH88 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Depdc1bQ8BH88 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Depdc1bQ8BH88 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.09□□□□□ -0.31
Depdc1bQ8BH88 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Depdc1bQ8BH88 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Depdc1bQ8BH88 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Depdc1bQ8BH88 Gm16505-201ENSMUST00000179981 232 ntBASIC13.09□□□□□ -0.31
Depdc1bQ8BH88 Gm2260-201ENSMUST00000184965 657 ntBASIC13.09□□□□□ -0.31
Depdc1bQ8BH88 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC13.09□□□□□ -0.31
Depdc1bQ8BH88 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.09□□□□□ -0.31
Depdc1bQ8BH88 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC13.09□□□□□ -0.31
Depdc1bQ8BH88 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.09□□□□□ -0.31
Depdc1bQ8BH88 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Depdc1bQ8BH88 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Depdc1bQ8BH88 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Depdc1bQ8BH88 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Depdc1bQ8BH88 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Depdc1bQ8BH88 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Depdc1bQ8BH88 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Depdc1bQ8BH88 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Depdc1bQ8BH88 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Depdc1bQ8BH88 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC13.09□□□□□ -0.31
Depdc1bQ8BH88 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Depdc1bQ8BH88 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Depdc1bQ8BH88 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Depdc1bQ8BH88 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Depdc1bQ8BH88 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Depdc1bQ8BH88 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Depdc1bQ8BH88 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Depdc1bQ8BH88 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Depdc1bQ8BH88 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Depdc1bQ8BH88 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Depdc1bQ8BH88 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Depdc1bQ8BH88 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.32
Depdc1bQ8BH88 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Depdc1bQ8BH88 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Depdc1bQ8BH88 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms