Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Pcdh19Q80TF3 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh19Q80TF3 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh19Q80TF3 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Pcdh19Q80TF3 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh19Q80TF3 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh19Q80TF3 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh19Q80TF3 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.85□□□□□ -0.51
Pcdh19Q80TF3 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.85□□□□□ -0.51
Pcdh19Q80TF3 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Pcdh19Q80TF3 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh19Q80TF3 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh19Q80TF3 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh19Q80TF3 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh19Q80TF3 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh19Q80TF3 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh19Q80TF3 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh19Q80TF3 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh19Q80TF3 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh19Q80TF3 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Pcdh19Q80TF3 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh19Q80TF3 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Pcdh19Q80TF3 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Pcdh19Q80TF3 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh19Q80TF3 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh19Q80TF3 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Pcdh19Q80TF3 Gm26286-201ENSMUST00000104166 134 ntBASIC11.84□□□□□ -0.51
Pcdh19Q80TF3 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.84□□□□□ -0.51
Pcdh19Q80TF3 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.84□□□□□ -0.51
Pcdh19Q80TF3 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.84□□□□□ -0.51
Pcdh19Q80TF3 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh19Q80TF3 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.84□□□□□ -0.51
Pcdh19Q80TF3 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh19Q80TF3 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.84□□□□□ -0.51
Pcdh19Q80TF3 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh19Q80TF3 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh19Q80TF3 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh19Q80TF3 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Pcdh19Q80TF3 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh19Q80TF3 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh19Q80TF3 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Pcdh19Q80TF3 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.84□□□□□ -0.51
Pcdh19Q80TF3 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh19Q80TF3 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh19Q80TF3 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.84□□□□□ -0.51
Pcdh19Q80TF3 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh19Q80TF3 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Pcdh19Q80TF3 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Pcdh19Q80TF3 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh19Q80TF3 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh19Q80TF3 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.83□□□□□ -0.52
Pcdh19Q80TF3 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh19Q80TF3 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh19Q80TF3 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Pcdh19Q80TF3 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh19Q80TF3 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh19Q80TF3 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh19Q80TF3 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Pcdh19Q80TF3 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh19Q80TF3 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.83□□□□□ -0.52
Pcdh19Q80TF3 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh19Q80TF3 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh19Q80TF3 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh19Q80TF3 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Pcdh19Q80TF3 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.83□□□□□ -0.52
Pcdh19Q80TF3 Gm13035-201ENSMUST00000117496 342 ntBASIC11.83□□□□□ -0.52
Pcdh19Q80TF3 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh19Q80TF3 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.83□□□□□ -0.52
Pcdh19Q80TF3 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.83□□□□□ -0.52
Pcdh19Q80TF3 Gm23085-201ENSMUST00000157849 293 ntBASIC11.83□□□□□ -0.52
Pcdh19Q80TF3 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.83□□□□□ -0.52
Pcdh19Q80TF3 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC11.83□□□□□ -0.52
Pcdh19Q80TF3 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh19Q80TF3 Gm3786-201ENSMUST00000202659 378 ntBASIC11.83□□□□□ -0.52
Pcdh19Q80TF3 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh19Q80TF3 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh19Q80TF3 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Pcdh19Q80TF3 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh19Q80TF3 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh19Q80TF3 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh19Q80TF3 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.83□□□□□ -0.52
Pcdh19Q80TF3 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Pcdh19Q80TF3 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh19Q80TF3 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh19Q80TF3 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.83□□□□□ -0.52
Pcdh19Q80TF3 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh19Q80TF3 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh19Q80TF3 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh19Q80TF3 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh19Q80TF3 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Pcdh19Q80TF3 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.83□□□□□ -0.52
Pcdh19Q80TF3 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.83□□□□□ -0.52
Pcdh19Q80TF3 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh19Q80TF3 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh19Q80TF3 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms