Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Scube3Q66PY1 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scube3Q66PY1 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Scube3Q66PY1 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scube3Q66PY1 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scube3Q66PY1 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scube3Q66PY1 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Scube3Q66PY1 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.83□□□□□ -0.36
Scube3Q66PY1 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scube3Q66PY1 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scube3Q66PY1 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scube3Q66PY1 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scube3Q66PY1 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Scube3Q66PY1 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Scube3Q66PY1 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scube3Q66PY1 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.82□□□□□ -0.36
Scube3Q66PY1 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Scube3Q66PY1 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.82□□□□□ -0.36
Scube3Q66PY1 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scube3Q66PY1 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scube3Q66PY1 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Scube3Q66PY1 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Scube3Q66PY1 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Scube3Q66PY1 Gm43052-201ENSMUST00000201451 1628 ntBASIC12.82□□□□□ -0.36
Scube3Q66PY1 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scube3Q66PY1 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.82□□□□□ -0.36
Scube3Q66PY1 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.82□□□□□ -0.36
Scube3Q66PY1 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.82□□□□□ -0.36
Scube3Q66PY1 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.82□□□□□ -0.36
Scube3Q66PY1 Ppp1r2-ps9-202ENSMUST00000173852 882 ntBASIC12.82□□□□□ -0.36
Scube3Q66PY1 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.82□□□□□ -0.36
Scube3Q66PY1 Gm3159-203ENSMUST00000177764 618 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Scube3Q66PY1 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Scube3Q66PY1 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Scube3Q66PY1 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC12.82□□□□□ -0.36
Scube3Q66PY1 Gm18711-201ENSMUST00000199341 750 ntBASIC12.82□□□□□ -0.36
Scube3Q66PY1 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Scube3Q66PY1 Gm45186-201ENSMUST00000206874 478 ntBASIC12.82□□□□□ -0.36
Scube3Q66PY1 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC12.82□□□□□ -0.36
Scube3Q66PY1 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.82□□□□□ -0.36
Scube3Q66PY1 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Scube3Q66PY1 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.82□□□□□ -0.36
Scube3Q66PY1 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scube3Q66PY1 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scube3Q66PY1 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scube3Q66PY1 Gm6578-201ENSMUST00000080891 984 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Scube3Q66PY1 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scube3Q66PY1 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.82□□□□□ -0.36
Scube3Q66PY1 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scube3Q66PY1 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Scube3Q66PY1 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scube3Q66PY1 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scube3Q66PY1 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Scube3Q66PY1 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.82□□□□□ -0.36
Scube3Q66PY1 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Scube3Q66PY1 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.82□□□□□ -0.36
Scube3Q66PY1 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scube3Q66PY1 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.82□□□□□ -0.36
Scube3Q66PY1 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Scube3Q66PY1 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scube3Q66PY1 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.82□□□□□ -0.36
Scube3Q66PY1 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scube3Q66PY1 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scube3Q66PY1 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Scube3Q66PY1 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.82□□□□□ -0.36
Scube3Q66PY1 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Scube3Q66PY1 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Scube3Q66PY1 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scube3Q66PY1 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.81□□□□□ -0.36
Scube3Q66PY1 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scube3Q66PY1 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.81□□□□□ -0.36
Scube3Q66PY1 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Scube3Q66PY1 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Scube3Q66PY1 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scube3Q66PY1 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scube3Q66PY1 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scube3Q66PY1 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scube3Q66PY1 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scube3Q66PY1 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scube3Q66PY1 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Scube3Q66PY1 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scube3Q66PY1 Gm14130-201ENSMUST00000118417 987 ntBASIC12.81□□□□□ -0.36
Scube3Q66PY1 Gm13996-201ENSMUST00000118456 430 ntBASIC12.81□□□□□ -0.36
Scube3Q66PY1 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scube3Q66PY1 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scube3Q66PY1 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scube3Q66PY1 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.81□□□□□ -0.36
Scube3Q66PY1 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC12.81□□□□□ -0.36
Scube3Q66PY1 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC12.81□□□□□ -0.36
Scube3Q66PY1 Gm43138-201ENSMUST00000199123 708 ntBASIC12.81□□□□□ -0.36
Scube3Q66PY1 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Scube3Q66PY1 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.81□□□□□ -0.36
Scube3Q66PY1 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC12.81□□□□□ -0.36
Scube3Q66PY1 Msmb-201ENSMUST00000022464 562 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scube3Q66PY1 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scube3Q66PY1 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scube3Q66PY1 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scube3Q66PY1 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Scube3Q66PY1 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scube3Q66PY1 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms