Protein–RNA interactions for Protein: Q62209

Sycp1, Synaptonemal complex protein 1, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sycp1Q62209 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sycp1Q62209 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sycp1Q62209 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Sycp1Q62209 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sycp1Q62209 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Sycp1Q62209 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sycp1Q62209 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sycp1Q62209 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Sycp1Q62209 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sycp1Q62209 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Sycp1Q62209 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sycp1Q62209 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sycp1Q62209 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sycp1Q62209 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sycp1Q62209 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sycp1Q62209 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Sycp1Q62209 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Sycp1Q62209 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sycp1Q62209 Gm14832-201ENSMUST00000121289 322 ntBASIC13.53□□□□□ -0.24
Sycp1Q62209 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Sycp1Q62209 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Sycp1Q62209 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.53□□□□□ -0.24
Sycp1Q62209 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sycp1Q62209 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sycp1Q62209 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sycp1Q62209 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Sycp1Q62209 Gm18626-201ENSMUST00000221512 1409 ntBASIC13.53□□□□□ -0.24
Sycp1Q62209 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sycp1Q62209 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sycp1Q62209 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Sycp1Q62209 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sycp1Q62209 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Sycp1Q62209 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Sycp1Q62209 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
Sycp1Q62209 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sycp1Q62209 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Sycp1Q62209 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Sycp1Q62209 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Sycp1Q62209 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Sycp1Q62209 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Sycp1Q62209 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sycp1Q62209 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Sycp1Q62209 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Sycp1Q62209 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sycp1Q62209 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC13.52□□□□□ -0.24
Sycp1Q62209 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.52□□□□□ -0.24
Sycp1Q62209 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sycp1Q62209 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sycp1Q62209 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sycp1Q62209 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sycp1Q62209 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sycp1Q62209 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sycp1Q62209 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sycp1Q62209 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sycp1Q62209 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sycp1Q62209 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC13.52□□□□□ -0.25
Sycp1Q62209 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.52□□□□□ -0.25
Sycp1Q62209 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.52□□□□□ -0.25
Sycp1Q62209 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC13.52□□□□□ -0.25
Sycp1Q62209 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Sycp1Q62209 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.52□□□□□ -0.25
Sycp1Q62209 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.52□□□□□ -0.25
Sycp1Q62209 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sycp1Q62209 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Sycp1Q62209 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Sycp1Q62209 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sycp1Q62209 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sycp1Q62209 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sycp1Q62209 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.52□□□□□ -0.25
Sycp1Q62209 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sycp1Q62209 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Sycp1Q62209 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Sycp1Q62209 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sycp1Q62209 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sycp1Q62209 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sycp1Q62209 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Sycp1Q62209 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sycp1Q62209 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sycp1Q62209 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.51□□□□□ -0.25
Sycp1Q62209 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sycp1Q62209 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Sycp1Q62209 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sycp1Q62209 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC13.51□□□□□ -0.25
Sycp1Q62209 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.51□□□□□ -0.25
Sycp1Q62209 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sycp1Q62209 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13.51□□□□□ -0.25
Sycp1Q62209 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC13.51□□□□□ -0.25
Sycp1Q62209 Gm24934-201ENSMUST00000103764 111 ntBASIC13.51□□□□□ -0.25
Sycp1Q62209 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Sycp1Q62209 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Sycp1Q62209 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sycp1Q62209 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sycp1Q62209 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.51□□□□□ -0.25
Sycp1Q62209 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sycp1Q62209 Gm20482-202ENSMUST00000174729 825 ntBASIC13.51□□□□□ -0.25
Sycp1Q62209 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sycp1Q62209 Gm27046-201ENSMUST00000182160 463 ntBASIC13.51□□□□□ -0.25
Sycp1Q62209 Gm27320-201ENSMUST00000184892 109 ntBASIC13.51□□□□□ -0.25
Sycp1Q62209 Gm3096-201ENSMUST00000185770 364 ntBASIC13.51□□□□□ -0.25
Sycp1Q62209 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms