Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rai1Q61818 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rai1Q61818 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rai1Q61818 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rai1Q61818 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rai1Q61818 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rai1Q61818 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Rai1Q61818 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.48□□□□□ -0.57
Rai1Q61818 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rai1Q61818 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.48□□□□□ -0.57
Rai1Q61818 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rai1Q61818 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Rai1Q61818 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rai1Q61818 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rai1Q61818 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rai1Q61818 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rai1Q61818 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Rai1Q61818 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rai1Q61818 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.47□□□□□ -0.57
Rai1Q61818 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rai1Q61818 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rai1Q61818 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rai1Q61818 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rai1Q61818 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC11.47□□□□□ -0.57
Rai1Q61818 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC11.47□□□□□ -0.57
Rai1Q61818 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.47□□□□□ -0.57
Rai1Q61818 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Rai1Q61818 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.47□□□□□ -0.57
Rai1Q61818 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC11.47□□□□□ -0.57
Rai1Q61818 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.47□□□□□ -0.57
Rai1Q61818 Gm45410-201ENSMUST00000211331 1093 ntBASIC11.47□□□□□ -0.57
Rai1Q61818 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.47□□□□□ -0.57
Rai1Q61818 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rai1Q61818 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rai1Q61818 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rai1Q61818 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rai1Q61818 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rai1Q61818 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rai1Q61818 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rai1Q61818 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rai1Q61818 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rai1Q61818 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rai1Q61818 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Rai1Q61818 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rai1Q61818 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rai1Q61818 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rai1Q61818 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.47□□□□□ -0.57
Rai1Q61818 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rai1Q61818 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.47□□□□□ -0.57
Rai1Q61818 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rai1Q61818 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rai1Q61818 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rai1Q61818 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rai1Q61818 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rai1Q61818 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rai1Q61818 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
Rai1Q61818 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rai1Q61818 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rai1Q61818 Gm11960-201ENSMUST00000122068 925 ntBASIC11.46□□□□□ -0.57
Rai1Q61818 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rai1Q61818 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC11.46□□□□□ -0.57
Rai1Q61818 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Rai1Q61818 Gm5982-201ENSMUST00000196234 512 ntBASIC11.46□□□□□ -0.57
Rai1Q61818 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rai1Q61818 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rai1Q61818 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.46□□□□□ -0.57
Rai1Q61818 AC129308.3-201ENSMUST00000225652 524 ntBASIC11.46□□□□□ -0.57
Rai1Q61818 AC165154.1-201ENSMUST00000226661 340 ntBASIC11.46□□□□□ -0.57
Rai1Q61818 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rai1Q61818 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rai1Q61818 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rai1Q61818 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC11.46□□□□□ -0.57
Rai1Q61818 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rai1Q61818 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rai1Q61818 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rai1Q61818 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rai1Q61818 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rai1Q61818 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rai1Q61818 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rai1Q61818 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rai1Q61818 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rai1Q61818 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rai1Q61818 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Rai1Q61818 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rai1Q61818 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rai1Q61818 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Rai1Q61818 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Rai1Q61818 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.58
Rai1Q61818 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rai1Q61818 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Rai1Q61818 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rai1Q61818 Gm12036-201ENSMUST00000120008 530 ntBASIC11.46□□□□□ -0.58
Rai1Q61818 Gm10169-201ENSMUST00000121822 348 ntBASIC11.46□□□□□ -0.58
Rai1Q61818 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC11.46□□□□□ -0.58
Rai1Q61818 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Rai1Q61818 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.46□□□□□ -0.58
Rai1Q61818 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Rai1Q61818 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.58
Rai1Q61818 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rai1Q61818 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms