Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Gm35960-201ENSMUST00000202712 767 ntBASIC12.12□□□□□ -0.47
Six4Q61321 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Six4Q61321 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.12□□□□□ -0.47
Six4Q61321 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Six4Q61321 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Six4Q61321 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.12□□□□□ -0.47
Six4Q61321 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Six4Q61321 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Six4Q61321 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Six4Q61321 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Six4Q61321 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Six4Q61321 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Six4Q61321 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.12□□□□□ -0.47
Six4Q61321 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Six4Q61321 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Six4Q61321 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.12□□□□□ -0.47
Six4Q61321 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.12□□□□□ -0.47
Six4Q61321 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Six4Q61321 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Six4Q61321 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Six4Q61321 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Six4Q61321 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Six4Q61321 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Six4Q61321 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six4Q61321 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six4Q61321 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Six4Q61321 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Six4Q61321 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.11□□□□□ -0.47
Six4Q61321 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six4Q61321 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six4Q61321 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Six4Q61321 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six4Q61321 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six4Q61321 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six4Q61321 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Six4Q61321 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six4Q61321 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six4Q61321 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Six4Q61321 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six4Q61321 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six4Q61321 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.11□□□□□ -0.47
Six4Q61321 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Six4Q61321 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.11□□□□□ -0.47
Six4Q61321 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six4Q61321 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six4Q61321 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six4Q61321 Gm15236-201ENSMUST00000117309 379 ntBASIC12.11□□□□□ -0.47
Six4Q61321 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.11□□□□□ -0.47
Six4Q61321 Gm12997-201ENSMUST00000120207 640 ntBASIC12.11□□□□□ -0.47
Six4Q61321 Gm14441-201ENSMUST00000121960 540 ntBASIC12.11□□□□□ -0.47
Six4Q61321 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six4Q61321 Gm27341-201ENSMUST00000183570 106 ntBASIC12.11□□□□□ -0.47
Six4Q61321 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.11□□□□□ -0.47
Six4Q61321 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six4Q61321 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.11□□□□□ -0.47
Six4Q61321 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six4Q61321 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Six4Q61321 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Six4Q61321 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Six4Q61321 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Six4Q61321 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six4Q61321 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Six4Q61321 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six4Q61321 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six4Q61321 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.11□□□□□ -0.47
Six4Q61321 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six4Q61321 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six4Q61321 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Six4Q61321 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Six4Q61321 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.1□□□□□ -0.47
Six4Q61321 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Six4Q61321 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six4Q61321 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six4Q61321 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six4Q61321 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Six4Q61321 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six4Q61321 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Six4Q61321 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Six4Q61321 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six4Q61321 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Six4Q61321 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Six4Q61321 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Six4Q61321 Gm11439-201ENSMUST00000118598 409 ntBASIC12.1□□□□□ -0.47
Six4Q61321 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Six4Q61321 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six4Q61321 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.1□□□□□ -0.47
Six4Q61321 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Six4Q61321 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.1□□□□□ -0.47
Six4Q61321 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Six4Q61321 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Six4Q61321 Gm9192-201ENSMUST00000183221 985 ntBASIC12.1□□□□□ -0.47
Six4Q61321 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Six4Q61321 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.1□□□□□ -0.47
Six4Q61321 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six4Q61321 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Six4Q61321 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Six4Q61321 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six4Q61321 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Six4Q61321 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.1□□□□□ -0.47
Six4Q61321 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms