Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Mir8102-201ENSMUST00000184148 139 ntBASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Gm20445-201ENSMUST00000061905 565 ntBASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Gm6714-201ENSMUST00000218677 2330 ntBASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC9.04□□□□□ -0.96
Trav3-3Q5R1C3 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Ndufb2-205ENSMUST00000135671 4371 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Lipg-201ENSMUST00000066532 3787 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Cd163-201ENSMUST00000032234 4404 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Gm6161-201ENSMUST00000121942 1102 ntBASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Gm6254-201ENSMUST00000168178 1072 ntBASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Gm6153-201ENSMUST00000172004 1058 ntBASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Gm5641-202ENSMUST00000198699 1080 ntBASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Gm19078-201ENSMUST00000206311 727 ntBASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Gm44872-201ENSMUST00000207864 420 ntBASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 CT573086.1-201ENSMUST00000227202 1074 ntBASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Gm44369-201ENSMUST00000204543 2175 ntBASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav3-3Q5R1C3 Gm45597-201ENSMUST00000211524 1994 ntBASIC9.03□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 237.8 ms