Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.8
Tff1Q08423 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Tff1Q08423 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.02□□□□□ -0.8
Tff1Q08423 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Tff1Q08423 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Tff1Q08423 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Tff1Q08423 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Tff1Q08423 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.02□□□□□ -0.81
Tff1Q08423 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Tff1Q08423 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Tff1Q08423 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Tff1Q08423 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.02□□□□□ -0.81
Tff1Q08423 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Tff1Q08423 Gm22902-201ENSMUST00000158488 302 ntBASIC10.02□□□□□ -0.81
Tff1Q08423 Gm6222-202ENSMUST00000182143 629 ntBASIC10.02□□□□□ -0.81
Tff1Q08423 Gm7046-201ENSMUST00000221351 977 ntBASIC10.02□□□□□ -0.81
Tff1Q08423 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Tff1Q08423 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.02□□□□□ -0.81
Tff1Q08423 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Tff1Q08423 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Tff1Q08423 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Tff1Q08423 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.02□□□□□ -0.81
Tff1Q08423 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Tff1Q08423 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.02□□□□□ -0.81
Tff1Q08423 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Tff1Q08423 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Tff1Q08423 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Tff1Q08423 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Tff1Q08423 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Tff1Q08423 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Tff1Q08423 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Tff1Q08423 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Tff1Q08423 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Tff1Q08423 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Tff1Q08423 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Tff1Q08423 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.02□□□□□ -0.81
Tff1Q08423 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Tff1Q08423 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tff1Q08423 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Tff1Q08423 Gm45342-201ENSMUST00000210903 1363 ntBASIC10.01□□□□□ -0.81
Tff1Q08423 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Tff1Q08423 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tff1Q08423 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tff1Q08423 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tff1Q08423 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tff1Q08423 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Tff1Q08423 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tff1Q08423 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tff1Q08423 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Tff1Q08423 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Tff1Q08423 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC10.01□□□□□ -0.81
Tff1Q08423 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.01□□□□□ -0.81
Tff1Q08423 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tff1Q08423 AC127597.1-201ENSMUST00000225697 5711 ntBASIC10.01□□□□□ -0.81
Tff1Q08423 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Tff1Q08423 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tff1Q08423 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Tff1Q08423 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tff1Q08423 Gm12176-201ENSMUST00000121420 875 ntBASIC10.01□□□□□ -0.81
Tff1Q08423 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Tff1Q08423 Gm8738-201ENSMUST00000172606 329 ntBASIC10.01□□□□□ -0.81
Tff1Q08423 Mospd4-201ENSMUST00000180618 576 ntBASIC10.01□□□□□ -0.81
Tff1Q08423 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Tff1Q08423 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.01□□□□□ -0.81
Tff1Q08423 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.01□□□□□ -0.81
Tff1Q08423 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC10.01□□□□□ -0.81
Tff1Q08423 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC10.01□□□□□ -0.81
Tff1Q08423 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Tff1Q08423 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tff1Q08423 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Tff1Q08423 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tff1Q08423 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tff1Q08423 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Tff1Q08423 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tff1Q08423 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tff1Q08423 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tff1Q08423 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tff1Q08423 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tff1Q08423 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tff1Q08423 Gm9333-201ENSMUST00000205452 1323 ntBASIC10.01□□□□□ -0.81
Tff1Q08423 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tff1Q08423 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tff1Q08423 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Tff1Q08423 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Tff1Q08423 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Tff1Q08423 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tff1Q08423 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Tff1Q08423 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tff1Q08423 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tff1Q08423 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tff1Q08423 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Tff1Q08423 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Tff1Q08423 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Tff1Q08423 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Tff1Q08423 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Tff1Q08423 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.01□□□□□ -0.81
Tff1Q08423 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.01□□□□□ -0.81
Tff1Q08423 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tff1Q08423 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Tff1Q08423 Gm3756-201ENSMUST00000169182 1355 ntBASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms