Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox4Q06831 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.85□□□□□ -0.51
Sox4Q06831 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox4Q06831 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox4Q06831 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox4Q06831 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox4Q06831 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox4Q06831 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox4Q06831 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11.85□□□□□ -0.51
Sox4Q06831 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sox4Q06831 Gm23949-201ENSMUST00000104027 127 ntBASIC11.85□□□□□ -0.51
Sox4Q06831 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Sox4Q06831 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.85□□□□□ -0.51
Sox4Q06831 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sox4Q06831 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sox4Q06831 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.85□□□□□ -0.51
Sox4Q06831 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox4Q06831 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Sox4Q06831 Gm16505-201ENSMUST00000179981 232 ntBASIC11.85□□□□□ -0.51
Sox4Q06831 Gm5706-201ENSMUST00000181525 993 ntBASIC11.85□□□□□ -0.51
Sox4Q06831 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sox4Q06831 Gm28450-201ENSMUST00000187349 638 ntBASIC11.85□□□□□ -0.51
Sox4Q06831 Gm28071-201ENSMUST00000190355 478 ntBASIC11.85□□□□□ -0.51
Sox4Q06831 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.85□□□□□ -0.51
Sox4Q06831 Gm18893-201ENSMUST00000198416 943 ntBASIC11.85□□□□□ -0.51
Sox4Q06831 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sox4Q06831 Gm17931-201ENSMUST00000208132 634 ntBASIC11.85□□□□□ -0.51
Sox4Q06831 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.85□□□□□ -0.51
Sox4Q06831 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox4Q06831 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Sox4Q06831 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox4Q06831 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox4Q06831 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox4Q06831 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.85□□□□□ -0.51
Sox4Q06831 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sox4Q06831 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.85□□□□□ -0.51
Sox4Q06831 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox4Q06831 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox4Q06831 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox4Q06831 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sox4Q06831 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox4Q06831 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Sox4Q06831 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.85□□□□□ -0.51
Sox4Q06831 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Sox4Q06831 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox4Q06831 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox4Q06831 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox4Q06831 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.84□□□□□ -0.51
Sox4Q06831 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.84□□□□□ -0.51
Sox4Q06831 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox4Q06831 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Sox4Q06831 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox4Q06831 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.84□□□□□ -0.51
Sox4Q06831 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox4Q06831 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sox4Q06831 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox4Q06831 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox4Q06831 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox4Q06831 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Sox4Q06831 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox4Q06831 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox4Q06831 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.84□□□□□ -0.51
Sox4Q06831 Gm15610-201ENSMUST00000120584 195 ntBASIC11.84□□□□□ -0.51
Sox4Q06831 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.84□□□□□ -0.51
Sox4Q06831 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Sox4Q06831 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Sox4Q06831 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox4Q06831 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.84□□□□□ -0.51
Sox4Q06831 Gm18730-201ENSMUST00000218038 343 ntBASIC11.84□□□□□ -0.51
Sox4Q06831 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox4Q06831 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox4Q06831 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.84□□□□□ -0.51
Sox4Q06831 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Sox4Q06831 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sox4Q06831 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox4Q06831 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sox4Q06831 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox4Q06831 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sox4Q06831 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox4Q06831 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox4Q06831 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Sox4Q06831 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox4Q06831 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.84□□□□□ -0.51
Sox4Q06831 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.84□□□□□ -0.51
Sox4Q06831 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox4Q06831 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox4Q06831 Map1b-203ENSMUST00000223725 2669 ntBASIC11.83□□□□□ -0.51
Sox4Q06831 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox4Q06831 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox4Q06831 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox4Q06831 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sox4Q06831 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sox4Q06831 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sox4Q06831 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sox4Q06831 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sox4Q06831 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox4Q06831 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Sox4Q06831 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sox4Q06831 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox4Q06831 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms