Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC10.31□□□□□ -0.76
Col8a1Q00780 Gm7541-201ENSMUST00000118361 535 ntBASIC10.31□□□□□ -0.76
Col8a1Q00780 Gm14724-201ENSMUST00000118400 537 ntBASIC10.31□□□□□ -0.76
Col8a1Q00780 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a1Q00780 Gm15595-201ENSMUST00000120840 961 ntBASIC10.31□□□□□ -0.76
Col8a1Q00780 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC10.31□□□□□ -0.76
Col8a1Q00780 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a1Q00780 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC10.31□□□□□ -0.76
Col8a1Q00780 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC10.31□□□□□ -0.76
Col8a1Q00780 Gm17877-201ENSMUST00000192578 814 ntBASIC10.31□□□□□ -0.76
Col8a1Q00780 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC10.31□□□□□ -0.76
Col8a1Q00780 Gm2965-201ENSMUST00000198365 343 ntBASIC10.31□□□□□ -0.76
Col8a1Q00780 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC10.31□□□□□ -0.76
Col8a1Q00780 Gm6722-201ENSMUST00000221586 390 ntBASIC10.31□□□□□ -0.76
Col8a1Q00780 CT025602.2-201ENSMUST00000226553 772 ntBASIC10.31□□□□□ -0.76
Col8a1Q00780 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Col8a1Q00780 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a1Q00780 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Col8a1Q00780 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a1Q00780 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Col8a1Q00780 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a1Q00780 Gm42748-201ENSMUST00000199354 2341 ntBASIC10.31□□□□□ -0.76
Col8a1Q00780 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a1Q00780 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a1Q00780 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a1Q00780 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a1Q00780 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Col8a1Q00780 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a1Q00780 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a1Q00780 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a1Q00780 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a1Q00780 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a1Q00780 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a1Q00780 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a1Q00780 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a1Q00780 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Col8a1Q00780 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Col8a1Q00780 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Col8a1Q00780 Gm5989-201ENSMUST00000096092 2077 ntBASIC10.3□□□□□ -0.76
Col8a1Q00780 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Col8a1Q00780 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Col8a1Q00780 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC10.3□□□□□ -0.76
Col8a1Q00780 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Col8a1Q00780 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Col8a1Q00780 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Col8a1Q00780 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Col8a1Q00780 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Col8a1Q00780 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Col8a1Q00780 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Col8a1Q00780 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Col8a1Q00780 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.3□□□□□ -0.76
Col8a1Q00780 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
Col8a1Q00780 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Col8a1Q00780 AC117194.1-201ENSMUST00000224847 3002 ntBASIC10.3□□□□□ -0.76
Col8a1Q00780 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Col8a1Q00780 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Col8a1Q00780 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Col8a1Q00780 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Col8a1Q00780 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Col8a1Q00780 Gm9072-201ENSMUST00000218390 1514 ntBASIC10.3□□□□□ -0.76
Col8a1Q00780 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Col8a1Q00780 Cd63-ps-202ENSMUST00000154992 717 ntBASIC10.3□□□□□ -0.76
Col8a1Q00780 Gm22442-201ENSMUST00000157256 144 ntBASIC10.3□□□□□ -0.76
Col8a1Q00780 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.3□□□□□ -0.76
Col8a1Q00780 Gm18159-201ENSMUST00000174516 1070 ntBASIC10.3□□□□□ -0.76
Col8a1Q00780 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC10.3□□□□□ -0.76
Col8a1Q00780 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Col8a1Q00780 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Col8a1Q00780 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Col8a1Q00780 Gm43186-201ENSMUST00000198130 824 ntBASIC10.3□□□□□ -0.76
Col8a1Q00780 Gm43371-201ENSMUST00000202838 1031 ntBASIC10.3□□□□□ -0.76
Col8a1Q00780 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC10.3□□□□□ -0.76
Col8a1Q00780 Gm18463-201ENSMUST00000207258 474 ntBASIC10.3□□□□□ -0.76
Col8a1Q00780 Gm18059-201ENSMUST00000208073 580 ntBASIC10.3□□□□□ -0.76
Col8a1Q00780 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Col8a1Q00780 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.3□□□□□ -0.76
Col8a1Q00780 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC10.3□□□□□ -0.76
Col8a1Q00780 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC10.3□□□□□ -0.76
Col8a1Q00780 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10.3□□□□□ -0.76
Col8a1Q00780 AC115122.1-201ENSMUST00000224850 1040 ntBASIC10.3□□□□□ -0.76
Col8a1Q00780 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Col8a1Q00780 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Col8a1Q00780 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Col8a1Q00780 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Col8a1Q00780 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC10.3□□□□□ -0.76
Col8a1Q00780 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Col8a1Q00780 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Col8a1Q00780 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Col8a1Q00780 Gm43721-201ENSMUST00000199677 2313 ntBASIC10.3□□□□□ -0.76
Col8a1Q00780 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Col8a1Q00780 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Col8a1Q00780 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC10.3□□□□□ -0.76
Col8a1Q00780 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Col8a1Q00780 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Col8a1Q00780 Gm27194-201ENSMUST00000175753 2936 ntBASIC10.3□□□□□ -0.76
Col8a1Q00780 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Col8a1Q00780 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Col8a1Q00780 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.3□□□□□ -0.76
Col8a1Q00780 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Col8a1Q00780 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms