Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Gm44882-201ENSMUST00000205702 802 ntBASIC12.26□□□□□ -0.45
Thumpd3P97770 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.26□□□□□ -0.45
Thumpd3P97770 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Thumpd3P97770 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Thumpd3P97770 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Thumpd3P97770 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Thumpd3P97770 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Thumpd3P97770 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Thumpd3P97770 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Thumpd3P97770 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Thumpd3P97770 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Thumpd3P97770 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Thumpd3P97770 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Thumpd3P97770 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Thumpd3P97770 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Thumpd3P97770 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thumpd3P97770 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thumpd3P97770 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Thumpd3P97770 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thumpd3P97770 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thumpd3P97770 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.25□□□□□ -0.45
Thumpd3P97770 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.25□□□□□ -0.45
Thumpd3P97770 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thumpd3P97770 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.25□□□□□ -0.45
Thumpd3P97770 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thumpd3P97770 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thumpd3P97770 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thumpd3P97770 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thumpd3P97770 Gm12502-201ENSMUST00000120197 444 ntBASIC12.25□□□□□ -0.45
Thumpd3P97770 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.25□□□□□ -0.45
Thumpd3P97770 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Thumpd3P97770 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.25□□□□□ -0.45
Thumpd3P97770 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Thumpd3P97770 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Thumpd3P97770 Gm4857-201ENSMUST00000192718 785 ntBASIC12.25□□□□□ -0.45
Thumpd3P97770 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.25□□□□□ -0.45
Thumpd3P97770 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thumpd3P97770 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thumpd3P97770 Gm24136-201ENSMUST00000083374 165 ntBASIC12.25□□□□□ -0.45
Thumpd3P97770 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thumpd3P97770 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Thumpd3P97770 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thumpd3P97770 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thumpd3P97770 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Thumpd3P97770 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thumpd3P97770 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thumpd3P97770 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Thumpd3P97770 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thumpd3P97770 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thumpd3P97770 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thumpd3P97770 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Thumpd3P97770 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Thumpd3P97770 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thumpd3P97770 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thumpd3P97770 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Thumpd3P97770 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thumpd3P97770 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thumpd3P97770 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thumpd3P97770 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.25□□□□□ -0.45
Thumpd3P97770 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Thumpd3P97770 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Thumpd3P97770 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thumpd3P97770 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thumpd3P97770 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thumpd3P97770 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.24□□□□□ -0.45
Thumpd3P97770 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Thumpd3P97770 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thumpd3P97770 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thumpd3P97770 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.24□□□□□ -0.45
Thumpd3P97770 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Thumpd3P97770 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thumpd3P97770 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Thumpd3P97770 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thumpd3P97770 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thumpd3P97770 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.24□□□□□ -0.45
Thumpd3P97770 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thumpd3P97770 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Thumpd3P97770 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.24□□□□□ -0.45
Thumpd3P97770 Gm42463-201ENSMUST00000198041 4886 ntBASIC12.24□□□□□ -0.45
Thumpd3P97770 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.24□□□□□ -0.45
Thumpd3P97770 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Thumpd3P97770 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.24□□□□□ -0.45
Thumpd3P97770 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thumpd3P97770 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thumpd3P97770 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Thumpd3P97770 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thumpd3P97770 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.24□□□□□ -0.45
Thumpd3P97770 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thumpd3P97770 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Thumpd3P97770 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Thumpd3P97770 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Thumpd3P97770 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Thumpd3P97770 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Thumpd3P97770 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thumpd3P97770 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thumpd3P97770 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.24□□□□□ -0.45
Thumpd3P97770 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thumpd3P97770 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Thumpd3P97770 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Thumpd3P97770 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms