Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nkx2-3P97334 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
Nkx2-3P97334 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nkx2-3P97334 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Nkx2-3P97334 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC15.05■□□□□ -0
Nkx2-3P97334 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC15.05■□□□□ -0
Nkx2-3P97334 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Nkx2-3P97334 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC15.05■□□□□ -0
Nkx2-3P97334 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Nkx2-3P97334 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nkx2-3P97334 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nkx2-3P97334 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nkx2-3P97334 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Nkx2-3P97334 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nkx2-3P97334 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC15.04■□□□□ -0
Nkx2-3P97334 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nkx2-3P97334 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nkx2-3P97334 Gm5053-201ENSMUST00000208361 1678 ntBASIC15.04■□□□□ -0
Nkx2-3P97334 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Nkx2-3P97334 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nkx2-3P97334 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC15.04■□□□□ -0
Nkx2-3P97334 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nkx2-3P97334 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nkx2-3P97334 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC15.04■□□□□ -0
Nkx2-3P97334 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nkx2-3P97334 Gm22119-201ENSMUST00000175594 99 ntBASIC15.04■□□□□ -0
Nkx2-3P97334 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nkx2-3P97334 Gm44315-201ENSMUST00000203041 219 ntBASIC15.04■□□□□ -0
Nkx2-3P97334 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC15.04■□□□□ -0
Nkx2-3P97334 Gm3619-201ENSMUST00000219947 775 ntBASIC15.04■□□□□ -0
Nkx2-3P97334 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC15.04■□□□□ -0
Nkx2-3P97334 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC15.04■□□□□ -0
Nkx2-3P97334 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nkx2-3P97334 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Nkx2-3P97334 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Nkx2-3P97334 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nkx2-3P97334 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Nkx2-3P97334 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nkx2-3P97334 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nkx2-3P97334 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-3P97334 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Nkx2-3P97334 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-3P97334 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-3P97334 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-3P97334 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Nkx2-3P97334 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-3P97334 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-3P97334 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-3P97334 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-3P97334 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-3P97334 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-3P97334 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-3P97334 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC15.03■□□□□ -0
Nkx2-3P97334 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC15.03■□□□□ -0
Nkx2-3P97334 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-3P97334 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Nkx2-3P97334 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC15.03■□□□□ -0
Nkx2-3P97334 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-3P97334 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Nkx2-3P97334 Gm10807-201ENSMUST00000177134 795 ntBASIC15.03■□□□□ -0
Nkx2-3P97334 Gm6771-201ENSMUST00000182716 1001 ntBASIC15.03■□□□□ -0
Nkx2-3P97334 Mir6407-201ENSMUST00000184510 101 ntBASIC15.03■□□□□ -0
Nkx2-3P97334 Gm19166-201ENSMUST00000196041 1063 ntBASIC15.03■□□□□ -0
Nkx2-3P97334 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-3P97334 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC15.03■□□□□ -0
Nkx2-3P97334 Gm3028-201ENSMUST00000213805 1119 ntBASIC15.03■□□□□ -0
Nkx2-3P97334 AC153929.1-201ENSMUST00000219009 303 ntBASIC15.03■□□□□ -0
Nkx2-3P97334 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-3P97334 Gm19009-201ENSMUST00000223072 823 ntBASIC15.03■□□□□ -0
Nkx2-3P97334 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-3P97334 Gm23105-201ENSMUST00000083719 134 ntBASIC15.03■□□□□ -0
Nkx2-3P97334 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC15.03■□□□□ -0
Nkx2-3P97334 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-3P97334 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-3P97334 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-3P97334 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Nkx2-3P97334 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Nkx2-3P97334 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-3P97334 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC15.03■□□□□ -0
Nkx2-3P97334 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-3P97334 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-3P97334 Gm20554-201ENSMUST00000177421 2352 ntBASIC15.03■□□□□ -0
Nkx2-3P97334 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Nkx2-3P97334 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-3P97334 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Nkx2-3P97334 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Nkx2-3P97334 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.02■□□□□ -0
Nkx2-3P97334 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Nkx2-3P97334 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nkx2-3P97334 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
Nkx2-3P97334 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nkx2-3P97334 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC15.02■□□□□ -0
Nkx2-3P97334 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC15.02■□□□□ -0
Nkx2-3P97334 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC15.02■□□□□ -0
Nkx2-3P97334 Gm3671-201ENSMUST00000182463 1007 ntBASIC15.02■□□□□ -0
Nkx2-3P97334 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Nkx2-3P97334 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC15.02■□□□□ -0
Nkx2-3P97334 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC15.02■□□□□ -0
Nkx2-3P97334 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nkx2-3P97334 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 114 ms