Protein–RNA interactions for Protein: P82976

Gbx1, Homeobox protein GBX-1, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gbx1P82976 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gbx1P82976 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Gbx1P82976 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.32□□□□□ -0.6
Gbx1P82976 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.32□□□□□ -0.6
Gbx1P82976 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.32□□□□□ -0.6
Gbx1P82976 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gbx1P82976 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gbx1P82976 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gbx1P82976 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gbx1P82976 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.32□□□□□ -0.6
Gbx1P82976 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gbx1P82976 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gbx1P82976 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gbx1P82976 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gbx1P82976 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gbx1P82976 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Gbx1P82976 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Gbx1P82976 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.31□□□□□ -0.6
Gbx1P82976 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gbx1P82976 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Gbx1P82976 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.31□□□□□ -0.6
Gbx1P82976 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Gbx1P82976 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gbx1P82976 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gbx1P82976 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gbx1P82976 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Gbx1P82976 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gbx1P82976 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gbx1P82976 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Gbx1P82976 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gbx1P82976 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gbx1P82976 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gbx1P82976 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gbx1P82976 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.31□□□□□ -0.6
Gbx1P82976 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.31□□□□□ -0.6
Gbx1P82976 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gbx1P82976 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.31□□□□□ -0.6
Gbx1P82976 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gbx1P82976 Gm42627-201ENSMUST00000197347 224 ntBASIC11.31□□□□□ -0.6
Gbx1P82976 Gm42660-201ENSMUST00000197733 947 ntBASIC11.31□□□□□ -0.6
Gbx1P82976 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC11.31□□□□□ -0.6
Gbx1P82976 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gbx1P82976 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gbx1P82976 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gbx1P82976 Gm9823-201ENSMUST00000051212 327 ntBASIC11.31□□□□□ -0.6
Gbx1P82976 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gbx1P82976 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gbx1P82976 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gbx1P82976 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gbx1P82976 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gbx1P82976 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.31□□□□□ -0.6
Gbx1P82976 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gbx1P82976 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gbx1P82976 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gbx1P82976 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gbx1P82976 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gbx1P82976 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.31□□□□□ -0.6
Gbx1P82976 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gbx1P82976 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gbx1P82976 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gbx1P82976 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gbx1P82976 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gbx1P82976 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Gbx1P82976 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Gbx1P82976 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gbx1P82976 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gbx1P82976 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gbx1P82976 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gbx1P82976 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Gbx1P82976 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gbx1P82976 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gbx1P82976 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Gbx1P82976 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gbx1P82976 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.3□□□□□ -0.6
Gbx1P82976 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.3□□□□□ -0.6
Gbx1P82976 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gbx1P82976 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Gbx1P82976 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gbx1P82976 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gbx1P82976 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gbx1P82976 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gbx1P82976 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Gbx1P82976 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Gbx1P82976 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Gbx1P82976 Gm13786-201ENSMUST00000122371 333 ntBASIC11.3□□□□□ -0.6
Gbx1P82976 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC11.3□□□□□ -0.6
Gbx1P82976 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.3□□□□□ -0.6
Gbx1P82976 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.3□□□□□ -0.6
Gbx1P82976 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC11.3□□□□□ -0.6
Gbx1P82976 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.3□□□□□ -0.6
Gbx1P82976 Gm45880-201ENSMUST00000213041 853 ntBASIC11.3□□□□□ -0.6
Gbx1P82976 Gm7046-201ENSMUST00000221351 977 ntBASIC11.3□□□□□ -0.6
Gbx1P82976 Morn2-202ENSMUST00000227729 656 ntBASIC11.3□□□□□ -0.6
Gbx1P82976 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.3□□□□□ -0.6
Gbx1P82976 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gbx1P82976 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.3□□□□□ -0.6
Gbx1P82976 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gbx1P82976 Gm9996-201ENSMUST00000070359 913 ntBASIC11.3□□□□□ -0.6
Gbx1P82976 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gbx1P82976 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms