Protein–RNA interactions for Protein: P70658

Cxcr4, C-X-C chemokine receptor type 4, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr4P70658 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcr4P70658 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcr4P70658 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.3□□□□□ -0.6
Cxcr4P70658 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcr4P70658 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Cxcr4P70658 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcr4P70658 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.3□□□□□ -0.6
Cxcr4P70658 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcr4P70658 Gm14726-201ENSMUST00000120623 896 ntBASIC11.3□□□□□ -0.6
Cxcr4P70658 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcr4P70658 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.3□□□□□ -0.6
Cxcr4P70658 Gm31256-201ENSMUST00000194705 506 ntBASIC11.3□□□□□ -0.6
Cxcr4P70658 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.3□□□□□ -0.6
Cxcr4P70658 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.3□□□□□ -0.6
Cxcr4P70658 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.3□□□□□ -0.6
Cxcr4P70658 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcr4P70658 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.3□□□□□ -0.6
Cxcr4P70658 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcr4P70658 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcr4P70658 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Cxcr4P70658 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcr4P70658 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcr4P70658 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcr4P70658 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcr4P70658 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcr4P70658 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcr4P70658 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.3□□□□□ -0.6
Cxcr4P70658 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Cxcr4P70658 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcr4P70658 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Cxcr4P70658 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcr4P70658 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcr4P70658 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcr4P70658 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcr4P70658 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcr4P70658 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcr4P70658 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcr4P70658 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcr4P70658 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Cxcr4P70658 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcr4P70658 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcr4P70658 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcr4P70658 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcr4P70658 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.29□□□□□ -0.6
Cxcr4P70658 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcr4P70658 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.29□□□□□ -0.6
Cxcr4P70658 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Cxcr4P70658 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Cxcr4P70658 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcr4P70658 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.29□□□□□ -0.6
Cxcr4P70658 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.29□□□□□ -0.6
Cxcr4P70658 Gm26083-201ENSMUST00000157904 193 ntBASIC11.29□□□□□ -0.6
Cxcr4P70658 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.29□□□□□ -0.6
Cxcr4P70658 Gm37201-201ENSMUST00000191845 523 ntBASIC11.29□□□□□ -0.6
Cxcr4P70658 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.29□□□□□ -0.6
Cxcr4P70658 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcr4P70658 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.29□□□□□ -0.6
Cxcr4P70658 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.29□□□□□ -0.6
Cxcr4P70658 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.29□□□□□ -0.6
Cxcr4P70658 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcr4P70658 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.29□□□□□ -0.6
Cxcr4P70658 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcr4P70658 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcr4P70658 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcr4P70658 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcr4P70658 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.29□□□□□ -0.6
Cxcr4P70658 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcr4P70658 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcr4P70658 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcr4P70658 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcr4P70658 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Cxcr4P70658 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Cxcr4P70658 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcr4P70658 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcr4P70658 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
Cxcr4P70658 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.29□□□□□ -0.6
Cxcr4P70658 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcr4P70658 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcr4P70658 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcr4P70658 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcr4P70658 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Cxcr4P70658 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cxcr4P70658 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Cxcr4P70658 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.28□□□□□ -0.6
Cxcr4P70658 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcr4P70658 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcr4P70658 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.28□□□□□ -0.6
Cxcr4P70658 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcr4P70658 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcr4P70658 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcr4P70658 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcr4P70658 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Cxcr4P70658 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcr4P70658 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcr4P70658 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcr4P70658 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcr4P70658 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.28□□□□□ -0.6
Cxcr4P70658 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.28□□□□□ -0.6
Cxcr4P70658 Gm25668-201ENSMUST00000157700 129 ntBASIC11.28□□□□□ -0.6
Cxcr4P70658 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 110.5 ms