Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cux2P70298 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cux2P70298 Gm30238-201ENSMUST00000195528 2603 ntBASIC19.32■□□□□ 0.68
Cux2P70298 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cux2P70298 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cux2P70298 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cux2P70298 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cux2P70298 Gm23604-201ENSMUST00000104311 132 ntBASIC19.32■□□□□ 0.68
Cux2P70298 Gm12986-201ENSMUST00000119037 967 ntBASIC19.32■□□□□ 0.68
Cux2P70298 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cux2P70298 Gm24992-201ENSMUST00000157412 130 ntBASIC19.32■□□□□ 0.68
Cux2P70298 Gm44106-201ENSMUST00000203153 1599 ntBASIC19.32■□□□□ 0.68
Cux2P70298 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cux2P70298 Gm26782-203ENSMUST00000227103 751 ntBASIC19.32■□□□□ 0.68
Cux2P70298 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cux2P70298 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Cux2P70298 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cux2P70298 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cux2P70298 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Cux2P70298 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cux2P70298 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Cux2P70298 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cux2P70298 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cux2P70298 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
Cux2P70298 Gm22937-201ENSMUST00000103954 131 ntBASIC19.31■□□□□ 0.68
Cux2P70298 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cux2P70298 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cux2P70298 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC19.31■□□□□ 0.68
Cux2P70298 Gm29067-201ENSMUST00000190821 470 ntBASIC19.31■□□□□ 0.68
Cux2P70298 Gm37207-201ENSMUST00000194284 296 ntBASIC19.31■□□□□ 0.68
Cux2P70298 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC19.31■□□□□ 0.68
Cux2P70298 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Cux2P70298 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Cux2P70298 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cux2P70298 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cux2P70298 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cux2P70298 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cux2P70298 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cux2P70298 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cux2P70298 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cux2P70298 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cux2P70298 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC19.3■□□□□ 0.68
Cux2P70298 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cux2P70298 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC19.3■□□□□ 0.68
Cux2P70298 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC19.3■□□□□ 0.68
Cux2P70298 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC19.3■□□□□ 0.68
Cux2P70298 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cux2P70298 Gm37284-201ENSMUST00000193607 539 ntBASIC19.3■□□□□ 0.68
Cux2P70298 Gm8234-201ENSMUST00000198523 1107 ntBASIC19.3■□□□□ 0.68
Cux2P70298 Gm44814-201ENSMUST00000207018 434 ntBASIC19.3■□□□□ 0.68
Cux2P70298 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC19.3■□□□□ 0.68
Cux2P70298 AC153929.1-201ENSMUST00000219009 303 ntBASIC19.3■□□□□ 0.68
Cux2P70298 CT030166.5-201ENSMUST00000222249 420 ntBASIC19.3■□□□□ 0.68
Cux2P70298 AC174797.2-201ENSMUST00000225835 165 ntBASIC19.3■□□□□ 0.68
Cux2P70298 AC164099.1-201ENSMUST00000227780 333 ntBASIC19.3■□□□□ 0.68
Cux2P70298 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Cux2P70298 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC19.3■□□□□ 0.68
Cux2P70298 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cux2P70298 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cux2P70298 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cux2P70298 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC19.3■□□□□ 0.68
Cux2P70298 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cux2P70298 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cux2P70298 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cux2P70298 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
Cux2P70298 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Cux2P70298 Gm6024-201ENSMUST00000117850 1558 ntBASIC19.3■□□□□ 0.68
Cux2P70298 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cux2P70298 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cux2P70298 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Cux2P70298 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC19.29■□□□□ 0.68
Cux2P70298 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC19.29■□□□□ 0.68
Cux2P70298 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cux2P70298 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cux2P70298 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Cux2P70298 Gm23595-201ENSMUST00000104306 130 ntBASIC19.29■□□□□ 0.68
Cux2P70298 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Cux2P70298 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC19.29■□□□□ 0.68
Cux2P70298 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
Cux2P70298 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cux2P70298 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cux2P70298 Gm6612-201ENSMUST00000170777 395 ntBASIC19.29■□□□□ 0.68
Cux2P70298 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cux2P70298 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cux2P70298 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cux2P70298 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC19.29■□□□□ 0.68
Cux2P70298 CT025603.1-201ENSMUST00000224040 448 ntBASIC19.29■□□□□ 0.68
Cux2P70298 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cux2P70298 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cux2P70298 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cux2P70298 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Cux2P70298 AC159810.1-201ENSMUST00000214838 1480 ntBASIC19.29■□□□□ 0.68
Cux2P70298 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cux2P70298 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cux2P70298 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC19.29■□□□□ 0.68
Cux2P70298 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cux2P70298 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cux2P70298 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Cux2P70298 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cux2P70298 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms