Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm6P62313 Gm43727-201ENSMUST00000198021 2647 ntBASIC10.58□□□□□ -0.72
Lsm6P62313 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm6P62313 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm6P62313 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm6P62313 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm6P62313 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.58□□□□□ -0.72
Lsm6P62313 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm6P62313 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm6P62313 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Lsm6P62313 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm6P62313 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm6P62313 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm6P62313 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm6P62313 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm6P62313 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm6P62313 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm6P62313 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC10.58□□□□□ -0.72
Lsm6P62313 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm6P62313 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm6P62313 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm6P62313 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.58□□□□□ -0.72
Lsm6P62313 Gm38266-201ENSMUST00000194931 421 ntBASIC10.58□□□□□ -0.72
Lsm6P62313 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC10.58□□□□□ -0.72
Lsm6P62313 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm6P62313 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm6P62313 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.58□□□□□ -0.72
Lsm6P62313 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm6P62313 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm6P62313 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm6P62313 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm6P62313 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm6P62313 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm6P62313 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm6P62313 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm6P62313 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm6P62313 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm6P62313 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm6P62313 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm6P62313 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm6P62313 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm6P62313 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.58□□□□□ -0.72
Lsm6P62313 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm6P62313 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm6P62313 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm6P62313 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm6P62313 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm6P62313 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lsm6P62313 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm6P62313 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Lsm6P62313 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm6P62313 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm6P62313 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Lsm6P62313 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Lsm6P62313 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Lsm6P62313 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm6P62313 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm6P62313 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Lsm6P62313 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm6P62313 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm6P62313 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm6P62313 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC10.57□□□□□ -0.72
Lsm6P62313 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.57□□□□□ -0.72
Lsm6P62313 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm6P62313 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm6P62313 Gm11989-201ENSMUST00000117240 672 ntBASIC10.57□□□□□ -0.72
Lsm6P62313 Gm14109-201ENSMUST00000118814 309 ntBASIC10.57□□□□□ -0.72
Lsm6P62313 Gm11362-201ENSMUST00000118838 850 ntBASIC10.57□□□□□ -0.72
Lsm6P62313 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.57□□□□□ -0.72
Lsm6P62313 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.57□□□□□ -0.72
Lsm6P62313 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm6P62313 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm6P62313 Gm27046-201ENSMUST00000182160 463 ntBASIC10.57□□□□□ -0.72
Lsm6P62313 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC10.57□□□□□ -0.72
Lsm6P62313 Gm44974-201ENSMUST00000206387 1279 ntBASIC10.57□□□□□ -0.72
Lsm6P62313 Gm19187-201ENSMUST00000206781 892 ntBASIC10.57□□□□□ -0.72
Lsm6P62313 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm6P62313 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm6P62313 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm6P62313 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm6P62313 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm6P62313 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Lsm6P62313 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Lsm6P62313 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm6P62313 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm6P62313 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm6P62313 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm6P62313 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC10.57□□□□□ -0.72
Lsm6P62313 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm6P62313 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm6P62313 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm6P62313 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm6P62313 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Lsm6P62313 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm6P62313 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm6P62313 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm6P62313 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm6P62313 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Lsm6P62313 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Lsm6P62313 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms