Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sssca1P56873 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sssca1P56873 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC9.72□□□□□ -0.85
Sssca1P56873 Auts2-212ENSMUST00000178555 309 ntBASIC9.72□□□□□ -0.85
Sssca1P56873 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Sssca1P56873 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sssca1P56873 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sssca1P56873 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sssca1P56873 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sssca1P56873 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sssca1P56873 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC9.72□□□□□ -0.85
Sssca1P56873 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sssca1P56873 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sssca1P56873 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sssca1P56873 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sssca1P56873 Gm37513-201ENSMUST00000194830 2268 ntBASIC9.72□□□□□ -0.85
Sssca1P56873 Gm38378-201ENSMUST00000195153 2268 ntBASIC9.72□□□□□ -0.85
Sssca1P56873 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Sssca1P56873 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sssca1P56873 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sssca1P56873 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sssca1P56873 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sssca1P56873 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Sssca1P56873 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sssca1P56873 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sssca1P56873 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Sssca1P56873 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Sssca1P56873 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Sssca1P56873 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Sssca1P56873 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Sssca1P56873 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Sssca1P56873 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC9.71□□□□□ -0.85
Sssca1P56873 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Sssca1P56873 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC9.71□□□□□ -0.85
Sssca1P56873 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Sssca1P56873 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Sssca1P56873 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Sssca1P56873 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Sssca1P56873 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC9.71□□□□□ -0.85
Sssca1P56873 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Sssca1P56873 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Sssca1P56873 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC9.71□□□□□ -0.85
Sssca1P56873 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Sssca1P56873 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Sssca1P56873 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Sssca1P56873 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Sssca1P56873 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC9.71□□□□□ -0.85
Sssca1P56873 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Sssca1P56873 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC9.71□□□□□ -0.85
Sssca1P56873 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Sssca1P56873 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Sssca1P56873 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC9.71□□□□□ -0.85
Sssca1P56873 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Sssca1P56873 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Sssca1P56873 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC9.71□□□□□ -0.86
Sssca1P56873 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC9.71□□□□□ -0.86
Sssca1P56873 Gm9431-201ENSMUST00000119765 1051 ntBASIC9.71□□□□□ -0.86
Sssca1P56873 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Sssca1P56873 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Sssca1P56873 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Sssca1P56873 Gm27839-201ENSMUST00000184242 106 ntBASIC9.71□□□□□ -0.86
Sssca1P56873 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Sssca1P56873 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC9.71□□□□□ -0.86
Sssca1P56873 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Sssca1P56873 Gm6091-201ENSMUST00000098307 165 ntBASIC9.71□□□□□ -0.86
Sssca1P56873 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Sssca1P56873 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC9.71□□□□□ -0.86
Sssca1P56873 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Sssca1P56873 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Sssca1P56873 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Sssca1P56873 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Sssca1P56873 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Sssca1P56873 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Sssca1P56873 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Sssca1P56873 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Sssca1P56873 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC9.71□□□□□ -0.86
Sssca1P56873 Gm45776-201ENSMUST00000212366 1522 ntBASIC9.71□□□□□ -0.86
Sssca1P56873 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC9.71□□□□□ -0.86
Sssca1P56873 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Sssca1P56873 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Sssca1P56873 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Sssca1P56873 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Sssca1P56873 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Sssca1P56873 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sssca1P56873 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Sssca1P56873 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sssca1P56873 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC9.7□□□□□ -0.86
Sssca1P56873 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sssca1P56873 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Sssca1P56873 Gm8522-201ENSMUST00000118416 1929 ntBASIC9.7□□□□□ -0.86
Sssca1P56873 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sssca1P56873 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sssca1P56873 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sssca1P56873 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sssca1P56873 Gm40377-201ENSMUST00000204604 2015 ntBASIC9.7□□□□□ -0.86
Sssca1P56873 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sssca1P56873 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Sssca1P56873 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Sssca1P56873 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sssca1P56873 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms