Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC12.82□□□□□ -0.36
NrlP54846 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC12.82□□□□□ -0.36
NrlP54846 Gm9540-201ENSMUST00000188230 478 ntBASIC12.82□□□□□ -0.36
NrlP54846 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NrlP54846 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.82□□□□□ -0.36
NrlP54846 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NrlP54846 Gm18711-201ENSMUST00000199341 750 ntBASIC12.82□□□□□ -0.36
NrlP54846 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.82□□□□□ -0.36
NrlP54846 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NrlP54846 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
NrlP54846 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NrlP54846 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
NrlP54846 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NrlP54846 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NrlP54846 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
NrlP54846 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.82□□□□□ -0.36
NrlP54846 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NrlP54846 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NrlP54846 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
NrlP54846 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
NrlP54846 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
NrlP54846 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NrlP54846 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NrlP54846 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NrlP54846 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NrlP54846 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
NrlP54846 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC12.81□□□□□ -0.36
NrlP54846 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
NrlP54846 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NrlP54846 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NrlP54846 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NrlP54846 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NrlP54846 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
NrlP54846 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NrlP54846 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NrlP54846 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NrlP54846 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NrlP54846 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NrlP54846 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.81□□□□□ -0.36
NrlP54846 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NrlP54846 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC12.81□□□□□ -0.36
NrlP54846 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.81□□□□□ -0.36
NrlP54846 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NrlP54846 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.81□□□□□ -0.36
NrlP54846 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.81□□□□□ -0.36
NrlP54846 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NrlP54846 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
NrlP54846 Gm7600-201ENSMUST00000209657 785 ntBASIC12.81□□□□□ -0.36
NrlP54846 Gm9132-201ENSMUST00000210182 832 ntBASIC12.81□□□□□ -0.36
NrlP54846 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC12.81□□□□□ -0.36
NrlP54846 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NrlP54846 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NrlP54846 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NrlP54846 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NrlP54846 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
NrlP54846 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NrlP54846 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
NrlP54846 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NrlP54846 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NrlP54846 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NrlP54846 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NrlP54846 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NrlP54846 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NrlP54846 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NrlP54846 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NrlP54846 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NrlP54846 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NrlP54846 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.8□□□□□ -0.36
NrlP54846 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NrlP54846 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NrlP54846 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NrlP54846 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.8□□□□□ -0.36
NrlP54846 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NrlP54846 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NrlP54846 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NrlP54846 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NrlP54846 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NrlP54846 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
NrlP54846 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
NrlP54846 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NrlP54846 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NrlP54846 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NrlP54846 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NrlP54846 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NrlP54846 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
NrlP54846 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
NrlP54846 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
NrlP54846 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NrlP54846 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
NrlP54846 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
NrlP54846 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
NrlP54846 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NrlP54846 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NrlP54846 Gm15573-201ENSMUST00000119487 540 ntBASIC12.8□□□□□ -0.36
NrlP54846 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NrlP54846 Gm5778-201ENSMUST00000171003 1072 ntBASIC12.8□□□□□ -0.36
NrlP54846 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NrlP54846 Gm28686-201ENSMUST00000187404 609 ntBASIC12.8□□□□□ -0.36
NrlP54846 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.8□□□□□ -0.36
NrlP54846 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms