Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox1P53783 AC130823.1-201ENSMUST00000228929 1549 ntBASIC12.31□□□□□ -0.44
Sox1P53783 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Sox1P53783 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox1P53783 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox1P53783 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox1P53783 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox1P53783 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox1P53783 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox1P53783 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Sox1P53783 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.3□□□□□ -0.44
Sox1P53783 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox1P53783 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox1P53783 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox1P53783 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.3□□□□□ -0.44
Sox1P53783 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox1P53783 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox1P53783 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox1P53783 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox1P53783 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox1P53783 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox1P53783 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox1P53783 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox1P53783 Gm15207-201ENSMUST00000119259 442 ntBASIC12.3□□□□□ -0.44
Sox1P53783 Gm12164-201ENSMUST00000121695 551 ntBASIC12.3□□□□□ -0.44
Sox1P53783 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox1P53783 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC12.3□□□□□ -0.44
Sox1P53783 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox1P53783 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.3□□□□□ -0.44
Sox1P53783 Gm4310-201ENSMUST00000177847 889 ntBASIC12.3□□□□□ -0.44
Sox1P53783 Gm7627-201ENSMUST00000183205 999 ntBASIC12.3□□□□□ -0.44
Sox1P53783 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox1P53783 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox1P53783 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC12.3□□□□□ -0.44
Sox1P53783 Gm30671-201ENSMUST00000214898 318 ntBASIC12.3□□□□□ -0.44
Sox1P53783 AC187103.3-201ENSMUST00000225725 646 ntBASIC12.3□□□□□ -0.44
Sox1P53783 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox1P53783 Gm6304-201ENSMUST00000096579 447 ntBASIC12.3□□□□□ -0.44
Sox1P53783 Olfr584-201ENSMUST00000098210 964 ntBASIC12.3□□□□□ -0.44
Sox1P53783 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox1P53783 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox1P53783 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox1P53783 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Sox1P53783 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox1P53783 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Sox1P53783 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox1P53783 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Sox1P53783 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox1P53783 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox1P53783 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.3□□□□□ -0.44
Sox1P53783 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox1P53783 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox1P53783 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox1P53783 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.29□□□□□ -0.44
Sox1P53783 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox1P53783 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox1P53783 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.29□□□□□ -0.44
Sox1P53783 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox1P53783 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox1P53783 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox1P53783 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Sox1P53783 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox1P53783 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox1P53783 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox1P53783 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Sox1P53783 Gm18294-201ENSMUST00000176980 1748 ntBASIC12.29□□□□□ -0.44
Sox1P53783 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox1P53783 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox1P53783 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.29□□□□□ -0.44
Sox1P53783 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Sox1P53783 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Sox1P53783 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox1P53783 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC12.29□□□□□ -0.44
Sox1P53783 Gm12461-201ENSMUST00000120231 1239 ntBASIC12.29□□□□□ -0.44
Sox1P53783 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.29□□□□□ -0.44
Sox1P53783 Gm7150-201ENSMUST00000122032 981 ntBASIC12.29□□□□□ -0.44
Sox1P53783 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox1P53783 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC12.29□□□□□ -0.44
Sox1P53783 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox1P53783 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox1P53783 Mir432-201ENSMUST00000157230 75 ntBASIC12.29□□□□□ -0.44
Sox1P53783 Gm9081-201ENSMUST00000182346 991 ntBASIC12.29□□□□□ -0.44
Sox1P53783 Gm43380-201ENSMUST00000200421 220 ntBASIC12.29□□□□□ -0.44
Sox1P53783 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Sox1P53783 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC12.29□□□□□ -0.44
Sox1P53783 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC12.29□□□□□ -0.44
Sox1P53783 AC154759.1-201ENSMUST00000224137 1159 ntBASIC12.29□□□□□ -0.44
Sox1P53783 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Sox1P53783 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Sox1P53783 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox1P53783 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox1P53783 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox1P53783 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.29□□□□□ -0.44
Sox1P53783 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox1P53783 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox1P53783 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox1P53783 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox1P53783 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.29□□□□□ -0.44
Sox1P53783 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Sox1P53783 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms