Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx2-1P50220 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Nkx2-1P50220 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Nkx2-1P50220 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Nkx2-1P50220 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Nkx2-1P50220 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Nkx2-1P50220 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Nkx2-1P50220 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Nkx2-1P50220 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Nkx2-1P50220 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Nkx2-1P50220 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Nkx2-1P50220 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Nkx2-1P50220 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Nkx2-1P50220 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Nkx2-1P50220 Gm12036-201ENSMUST00000120008 530 ntBASIC9.96□□□□□ -0.82
Nkx2-1P50220 Gm12490-201ENSMUST00000120255 560 ntBASIC9.96□□□□□ -0.82
Nkx2-1P50220 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Nkx2-1P50220 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC9.96□□□□□ -0.82
Nkx2-1P50220 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Nkx2-1P50220 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.82
Nkx2-1P50220 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC9.96□□□□□ -0.82
Nkx2-1P50220 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Nkx2-1P50220 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC9.96□□□□□ -0.82
Nkx2-1P50220 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
Nkx2-1P50220 AC124397.2-201ENSMUST00000225575 2215 ntBASIC9.96□□□□□ -0.82
Nkx2-1P50220 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Nkx2-1P50220 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Nkx2-1P50220 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Nkx2-1P50220 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Nkx2-1P50220 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Nkx2-1P50220 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Nkx2-1P50220 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Nkx2-1P50220 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC9.96□□□□□ -0.82
Nkx2-1P50220 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Nkx2-1P50220 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Nkx2-1P50220 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Nkx2-1P50220 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Nkx2-1P50220 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Nkx2-1P50220 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Nkx2-1P50220 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Gm40377-201ENSMUST00000204604 2015 ntBASIC9.95□□□□□ -0.82
Nkx2-1P50220 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Gm5859-201ENSMUST00000165401 2324 ntBASIC9.95□□□□□ -0.82
Nkx2-1P50220 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx2-1P50220 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Proscos-202ENSMUST00000178990 666 ntBASIC9.95□□□□□ -0.82
Nkx2-1P50220 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx2-1P50220 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC9.95□□□□□ -0.82
Nkx2-1P50220 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx2-1P50220 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Nkx2-1P50220 AC093022.4-203ENSMUST00000228523 2657 ntBASIC9.95□□□□□ -0.82
Nkx2-1P50220 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC9.95□□□□□ -0.82
Nkx2-1P50220 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms