Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Ercc3P49135 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ercc3P49135 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ercc3P49135 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Ercc3P49135 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ercc3P49135 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ercc3P49135 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ercc3P49135 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ercc3P49135 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ercc3P49135 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ercc3P49135 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Ercc3P49135 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ercc3P49135 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ercc3P49135 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ercc3P49135 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC14.3□□□□□ -0.12
Ercc3P49135 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Ercc3P49135 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ercc3P49135 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ercc3P49135 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ercc3P49135 Gm27530-201ENSMUST00000184096 98 ntBASIC14.3□□□□□ -0.12
Ercc3P49135 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ercc3P49135 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ercc3P49135 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC14.3□□□□□ -0.12
Ercc3P49135 Gm45433-201ENSMUST00000209386 247 ntBASIC14.3□□□□□ -0.12
Ercc3P49135 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC14.3□□□□□ -0.12
Ercc3P49135 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ercc3P49135 Gm8385-201ENSMUST00000058999 643 ntBASIC14.3□□□□□ -0.12
Ercc3P49135 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ercc3P49135 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ercc3P49135 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ercc3P49135 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC14.3□□□□□ -0.12
Ercc3P49135 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ercc3P49135 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ercc3P49135 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ercc3P49135 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ercc3P49135 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ercc3P49135 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ercc3P49135 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ercc3P49135 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ercc3P49135 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ercc3P49135 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ercc3P49135 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ercc3P49135 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ercc3P49135 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ercc3P49135 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ercc3P49135 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ercc3P49135 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ercc3P49135 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ercc3P49135 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ercc3P49135 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ercc3P49135 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ercc3P49135 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ercc3P49135 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ercc3P49135 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ercc3P49135 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ercc3P49135 Gm14247-201ENSMUST00000120950 237 ntBASIC14.29□□□□□ -0.12
Ercc3P49135 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ercc3P49135 Mir3102-201ENSMUST00000175555 104 ntBASIC14.29□□□□□ -0.12
Ercc3P49135 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ercc3P49135 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC14.29□□□□□ -0.12
Ercc3P49135 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ercc3P49135 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC14.29□□□□□ -0.12
Ercc3P49135 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ercc3P49135 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ercc3P49135 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ercc3P49135 AC154671.1-201ENSMUST00000228617 1578 ntBASIC14.29□□□□□ -0.12
Ercc3P49135 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ercc3P49135 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ercc3P49135 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ercc3P49135 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ercc3P49135 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ercc3P49135 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ercc3P49135 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ercc3P49135 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ercc3P49135 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ercc3P49135 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ercc3P49135 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Ercc3P49135 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ercc3P49135 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Ercc3P49135 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ercc3P49135 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ercc3P49135 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ercc3P49135 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC14.28□□□□□ -0.12
Ercc3P49135 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ercc3P49135 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ercc3P49135 Gm6189-201ENSMUST00000164487 2082 ntBASIC14.28□□□□□ -0.12
Ercc3P49135 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ercc3P49135 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ercc3P49135 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ercc3P49135 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ercc3P49135 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ercc3P49135 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ercc3P49135 Gm5525-201ENSMUST00000190438 1312 ntBASIC14.28□□□□□ -0.12
Ercc3P49135 Gm37466-201ENSMUST00000195692 652 ntBASIC14.28□□□□□ -0.12
Ercc3P49135 Gm43447-201ENSMUST00000198471 1535 ntBASIC14.28□□□□□ -0.12
Ercc3P49135 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ercc3P49135 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC14.28□□□□□ -0.12
Ercc3P49135 AC126257.1-201ENSMUST00000213195 1536 ntBASIC14.28□□□□□ -0.12
Ercc3P49135 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ercc3P49135 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms