Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prox1P48437 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prox1P48437 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prox1P48437 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.57□□□□□ -0.56
Prox1P48437 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prox1P48437 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prox1P48437 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prox1P48437 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prox1P48437 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prox1P48437 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Prox1P48437 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prox1P48437 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.57□□□□□ -0.56
Prox1P48437 Gm11814-201ENSMUST00000119515 929 ntBASIC11.57□□□□□ -0.56
Prox1P48437 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Prox1P48437 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Prox1P48437 Gm22331-201ENSMUST00000158066 136 ntBASIC11.57□□□□□ -0.56
Prox1P48437 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prox1P48437 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.57□□□□□ -0.56
Prox1P48437 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prox1P48437 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Prox1P48437 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Prox1P48437 Gm27486-201ENSMUST00000184923 80 ntBASIC11.57□□□□□ -0.56
Prox1P48437 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.57□□□□□ -0.56
Prox1P48437 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Prox1P48437 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.57□□□□□ -0.56
Prox1P48437 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prox1P48437 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prox1P48437 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prox1P48437 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prox1P48437 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prox1P48437 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prox1P48437 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prox1P48437 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.57□□□□□ -0.56
Prox1P48437 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Prox1P48437 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prox1P48437 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prox1P48437 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Prox1P48437 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.57□□□□□ -0.56
Prox1P48437 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.57□□□□□ -0.56
Prox1P48437 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prox1P48437 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prox1P48437 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prox1P48437 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prox1P48437 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Prox1P48437 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Prox1P48437 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Prox1P48437 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prox1P48437 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prox1P48437 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prox1P48437 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prox1P48437 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prox1P48437 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Prox1P48437 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prox1P48437 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.57□□□□□ -0.56
Prox1P48437 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prox1P48437 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Prox1P48437 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Prox1P48437 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Prox1P48437 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Prox1P48437 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.56□□□□□ -0.56
Prox1P48437 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Prox1P48437 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Prox1P48437 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Prox1P48437 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Prox1P48437 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Prox1P48437 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Prox1P48437 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Prox1P48437 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Prox1P48437 Gm13492-201ENSMUST00000119772 665 ntBASIC11.56□□□□□ -0.56
Prox1P48437 Gm12363-201ENSMUST00000122250 668 ntBASIC11.56□□□□□ -0.56
Prox1P48437 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.56□□□□□ -0.56
Prox1P48437 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Prox1P48437 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.56□□□□□ -0.56
Prox1P48437 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.56□□□□□ -0.56
Prox1P48437 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Prox1P48437 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Prox1P48437 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.56□□□□□ -0.56
Prox1P48437 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Prox1P48437 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.56□□□□□ -0.56
Prox1P48437 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.56□□□□□ -0.56
Prox1P48437 Gm29705-201ENSMUST00000212598 474 ntBASIC11.56□□□□□ -0.56
Prox1P48437 Gm32025-201ENSMUST00000217960 307 ntBASIC11.56□□□□□ -0.56
Prox1P48437 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Prox1P48437 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Prox1P48437 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Prox1P48437 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Prox1P48437 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Prox1P48437 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Prox1P48437 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Prox1P48437 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Prox1P48437 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Prox1P48437 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.56□□□□□ -0.56
Prox1P48437 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Prox1P48437 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Prox1P48437 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Prox1P48437 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Prox1P48437 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Prox1P48437 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Prox1P48437 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Prox1P48437 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms