Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps4bP46467 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.23□□□□□ -0.45
Vps4bP46467 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps4bP46467 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps4bP46467 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Vps4bP46467 Gm15808-201ENSMUST00000119046 604 ntBASIC12.23□□□□□ -0.45
Vps4bP46467 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.23□□□□□ -0.45
Vps4bP46467 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.23□□□□□ -0.45
Vps4bP46467 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.23□□□□□ -0.45
Vps4bP46467 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vps4bP46467 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Vps4bP46467 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.23□□□□□ -0.45
Vps4bP46467 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps4bP46467 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps4bP46467 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Vps4bP46467 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps4bP46467 Mir433-201ENSMUST00000093564 124 ntBASIC12.23□□□□□ -0.45
Vps4bP46467 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps4bP46467 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vps4bP46467 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps4bP46467 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Vps4bP46467 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Vps4bP46467 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vps4bP46467 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps4bP46467 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Vps4bP46467 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vps4bP46467 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps4bP46467 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps4bP46467 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps4bP46467 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps4bP46467 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.22□□□□□ -0.45
Vps4bP46467 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps4bP46467 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps4bP46467 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps4bP46467 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps4bP46467 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.22□□□□□ -0.45
Vps4bP46467 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.22□□□□□ -0.45
Vps4bP46467 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.22□□□□□ -0.45
Vps4bP46467 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps4bP46467 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps4bP46467 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vps4bP46467 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Vps4bP46467 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps4bP46467 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.22□□□□□ -0.45
Vps4bP46467 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vps4bP46467 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Vps4bP46467 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.22□□□□□ -0.45
Vps4bP46467 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vps4bP46467 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vps4bP46467 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vps4bP46467 Gm25043-201ENSMUST00000158604 212 ntBASIC12.22□□□□□ -0.45
Vps4bP46467 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.22□□□□□ -0.45
Vps4bP46467 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.22□□□□□ -0.45
Vps4bP46467 Mospd4-201ENSMUST00000180618 576 ntBASIC12.22□□□□□ -0.45
Vps4bP46467 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.22□□□□□ -0.45
Vps4bP46467 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vps4bP46467 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vps4bP46467 Gm18935-201ENSMUST00000212692 664 ntBASIC12.22□□□□□ -0.45
Vps4bP46467 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.22□□□□□ -0.45
Vps4bP46467 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps4bP46467 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps4bP46467 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.22□□□□□ -0.45
Vps4bP46467 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps4bP46467 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Vps4bP46467 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps4bP46467 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Vps4bP46467 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Vps4bP46467 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Vps4bP46467 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps4bP46467 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.22□□□□□ -0.45
Vps4bP46467 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps4bP46467 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps4bP46467 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps4bP46467 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps4bP46467 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps4bP46467 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps4bP46467 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps4bP46467 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Vps4bP46467 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps4bP46467 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vps4bP46467 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.21□□□□□ -0.45
Vps4bP46467 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vps4bP46467 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vps4bP46467 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Vps4bP46467 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Vps4bP46467 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.21□□□□□ -0.45
Vps4bP46467 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vps4bP46467 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vps4bP46467 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vps4bP46467 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vps4bP46467 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vps4bP46467 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vps4bP46467 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.21□□□□□ -0.45
Vps4bP46467 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.21□□□□□ -0.45
Vps4bP46467 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.21□□□□□ -0.45
Vps4bP46467 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vps4bP46467 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vps4bP46467 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Vps4bP46467 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.21□□□□□ -0.45
Vps4bP46467 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms