Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sox18P43680 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox18P43680 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Sox18P43680 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox18P43680 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Sox18P43680 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Sox18P43680 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sox18P43680 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sox18P43680 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sox18P43680 Gm13033-201ENSMUST00000117591 1057 ntBASIC11.75□□□□□ -0.53
Sox18P43680 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.75□□□□□ -0.53
Sox18P43680 Gm13182-201ENSMUST00000122241 312 ntBASIC11.75□□□□□ -0.53
Sox18P43680 Gm4726-201ENSMUST00000135604 736 ntBASIC11.75□□□□□ -0.53
Sox18P43680 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sox18P43680 Gm6019-201ENSMUST00000148369 736 ntBASIC11.75□□□□□ -0.53
Sox18P43680 Gm8100-201ENSMUST00000182906 988 ntBASIC11.75□□□□□ -0.53
Sox18P43680 Gm27910-201ENSMUST00000185004 107 ntBASIC11.75□□□□□ -0.53
Sox18P43680 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC11.75□□□□□ -0.53
Sox18P43680 Gm42464-201ENSMUST00000196717 417 ntBASIC11.75□□□□□ -0.53
Sox18P43680 Gm43184-201ENSMUST00000197247 542 ntBASIC11.75□□□□□ -0.53
Sox18P43680 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sox18P43680 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox18P43680 Gm43550-201ENSMUST00000200597 303 ntBASIC11.75□□□□□ -0.53
Sox18P43680 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC11.75□□□□□ -0.53
Sox18P43680 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC11.75□□□□□ -0.53
Sox18P43680 Gm19994-201ENSMUST00000217086 586 ntBASIC11.75□□□□□ -0.53
Sox18P43680 Gm5178-201ENSMUST00000219380 898 ntBASIC11.75□□□□□ -0.53
Sox18P43680 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox18P43680 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox18P43680 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox18P43680 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox18P43680 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Sox18P43680 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Sox18P43680 Gm9996-201ENSMUST00000070359 913 ntBASIC11.75□□□□□ -0.53
Sox18P43680 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Sox18P43680 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Sox18P43680 Gm26448-201ENSMUST00000082446 203 ntBASIC11.75□□□□□ -0.53
Sox18P43680 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox18P43680 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox18P43680 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.75□□□□□ -0.53
Sox18P43680 Timm21-201ENSMUST00000025547 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox18P43680 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox18P43680 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox18P43680 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sox18P43680 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox18P43680 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sox18P43680 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sox18P43680 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Sox18P43680 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.75□□□□□ -0.53
Sox18P43680 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.75□□□□□ -0.53
Sox18P43680 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox18P43680 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox18P43680 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sox18P43680 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Sox18P43680 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox18P43680 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox18P43680 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Sox18P43680 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.74□□□□□ -0.53
Sox18P43680 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.74□□□□□ -0.53
Sox18P43680 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11.74□□□□□ -0.53
Sox18P43680 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox18P43680 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox18P43680 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox18P43680 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.74□□□□□ -0.53
Sox18P43680 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox18P43680 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Sox18P43680 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox18P43680 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox18P43680 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox18P43680 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox18P43680 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox18P43680 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Sox18P43680 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox18P43680 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.74□□□□□ -0.53
Sox18P43680 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.74□□□□□ -0.53
Sox18P43680 Gm13313-201ENSMUST00000118938 1084 ntBASIC11.74□□□□□ -0.53
Sox18P43680 Gm13668-201ENSMUST00000119237 1001 ntBASIC11.74□□□□□ -0.53
Sox18P43680 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.74□□□□□ -0.53
Sox18P43680 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC11.74□□□□□ -0.53
Sox18P43680 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sox18P43680 Gm22144-201ENSMUST00000157402 102 ntBASIC11.74□□□□□ -0.53
Sox18P43680 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox18P43680 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Sox18P43680 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC11.74□□□□□ -0.53
Sox18P43680 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sox18P43680 Gm3332-201ENSMUST00000189337 928 ntBASIC11.74□□□□□ -0.53
Sox18P43680 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.74□□□□□ -0.53
Sox18P43680 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sox18P43680 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Sox18P43680 Gm18871-201ENSMUST00000218655 745 ntBASIC11.74□□□□□ -0.53
Sox18P43680 AC132384.6-201ENSMUST00000218976 1206 ntBASIC11.74□□□□□ -0.53
Sox18P43680 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.74□□□□□ -0.53
Sox18P43680 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.74□□□□□ -0.53
Sox18P43680 AC140375.1-201ENSMUST00000225421 694 ntBASIC11.74□□□□□ -0.53
Sox18P43680 AC129017.2-201ENSMUST00000226118 1284 ntBASIC11.74□□□□□ -0.53
Sox18P43680 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox18P43680 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Sox18P43680 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sox18P43680 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox18P43680 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms