Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfsf4P43488 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfsf4P43488 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.61□□□□□ -0.55
Tnfsf4P43488 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfsf4P43488 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.61□□□□□ -0.55
Tnfsf4P43488 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.61□□□□□ -0.55
Tnfsf4P43488 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.61□□□□□ -0.55
Tnfsf4P43488 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.61□□□□□ -0.55
Tnfsf4P43488 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfsf4P43488 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfsf4P43488 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Tnfsf4P43488 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfsf4P43488 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfsf4P43488 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfsf4P43488 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfsf4P43488 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Tnfsf4P43488 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Tnfsf4P43488 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfsf4P43488 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfsf4P43488 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfsf4P43488 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfsf4P43488 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfsf4P43488 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.61□□□□□ -0.55
Tnfsf4P43488 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfsf4P43488 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfsf4P43488 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfsf4P43488 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf4P43488 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf4P43488 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.6□□□□□ -0.55
Tnfsf4P43488 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf4P43488 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Tnfsf4P43488 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf4P43488 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.6□□□□□ -0.55
Tnfsf4P43488 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Tnfsf4P43488 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf4P43488 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf4P43488 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf4P43488 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
Tnfsf4P43488 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf4P43488 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf4P43488 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Tnfsf4P43488 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf4P43488 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf4P43488 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf4P43488 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.6□□□□□ -0.55
Tnfsf4P43488 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf4P43488 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf4P43488 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Tnfsf4P43488 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf4P43488 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf4P43488 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Tnfsf4P43488 Mir1247-201ENSMUST00000116706 82 ntBASIC11.6□□□□□ -0.55
Tnfsf4P43488 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.6□□□□□ -0.55
Tnfsf4P43488 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf4P43488 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.6□□□□□ -0.55
Tnfsf4P43488 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.6□□□□□ -0.55
Tnfsf4P43488 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.6□□□□□ -0.55
Tnfsf4P43488 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf4P43488 Gm45784-201ENSMUST00000188360 142 ntBASIC11.6□□□□□ -0.55
Tnfsf4P43488 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.6□□□□□ -0.55
Tnfsf4P43488 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf4P43488 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.6□□□□□ -0.55
Tnfsf4P43488 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.6□□□□□ -0.55
Tnfsf4P43488 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf4P43488 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.6□□□□□ -0.55
Tnfsf4P43488 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf4P43488 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf4P43488 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Tnfsf4P43488 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Tnfsf4P43488 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf4P43488 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Tnfsf4P43488 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Tnfsf4P43488 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf4P43488 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.6□□□□□ -0.55
Tnfsf4P43488 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf4P43488 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf4P43488 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf4P43488 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf4P43488 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf4P43488 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf4P43488 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfsf4P43488 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.59□□□□□ -0.55
Tnfsf4P43488 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfsf4P43488 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.59□□□□□ -0.55
Tnfsf4P43488 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfsf4P43488 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfsf4P43488 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.59□□□□□ -0.55
Tnfsf4P43488 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfsf4P43488 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfsf4P43488 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfsf4P43488 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Tnfsf4P43488 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Tnfsf4P43488 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Tnfsf4P43488 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfsf4P43488 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.59□□□□□ -0.55
Tnfsf4P43488 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfsf4P43488 Gm10434-201ENSMUST00000101158 471 ntBASIC11.59□□□□□ -0.55
Tnfsf4P43488 Gm13226-201ENSMUST00000117838 404 ntBASIC11.59□□□□□ -0.55
Tnfsf4P43488 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfsf4P43488 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms