Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC10.37□□□□□ -0.75
Slc6a1P31648 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Slc6a1P31648 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Slc6a1P31648 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Slc6a1P31648 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Slc6a1P31648 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC10.37□□□□□ -0.75
Slc6a1P31648 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Slc6a1P31648 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Slc6a1P31648 Gm45784-201ENSMUST00000188360 142 ntBASIC10.37□□□□□ -0.75
Slc6a1P31648 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC10.37□□□□□ -0.75
Slc6a1P31648 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Slc6a1P31648 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
Slc6a1P31648 Gm7067-201ENSMUST00000207698 1249 ntBASIC10.37□□□□□ -0.75
Slc6a1P31648 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC10.37□□□□□ -0.75
Slc6a1P31648 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
Slc6a1P31648 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc6a1P31648 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC10.37□□□□□ -0.75
Slc6a1P31648 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc6a1P31648 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc6a1P31648 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc6a1P31648 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc6a1P31648 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc6a1P31648 Gm10012-201ENSMUST00000078252 192 ntBASIC10.37□□□□□ -0.75
Slc6a1P31648 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.37□□□□□ -0.75
Slc6a1P31648 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.37□□□□□ -0.75
Slc6a1P31648 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc6a1P31648 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc6a1P31648 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Slc6a1P31648 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC10.37□□□□□ -0.75
Slc6a1P31648 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc6a1P31648 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC10.37□□□□□ -0.75
Slc6a1P31648 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc6a1P31648 Gm18630-201ENSMUST00000222109 1397 ntBASIC10.37□□□□□ -0.75
Slc6a1P31648 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc6a1P31648 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc6a1P31648 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc6a1P31648 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc6a1P31648 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Slc6a1P31648 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC10.36□□□□□ -0.75
Slc6a1P31648 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Slc6a1P31648 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.36□□□□□ -0.75
Slc6a1P31648 Gm26660-202ENSMUST00000223620 4112 ntBASIC10.36□□□□□ -0.75
Slc6a1P31648 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Slc6a1P31648 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Slc6a1P31648 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Slc6a1P31648 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.36□□□□□ -0.75
Slc6a1P31648 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Slc6a1P31648 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Slc6a1P31648 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Slc6a1P31648 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Slc6a1P31648 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Slc6a1P31648 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Slc6a1P31648 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC10.36□□□□□ -0.75
Slc6a1P31648 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Slc6a1P31648 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Slc6a1P31648 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Slc6a1P31648 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Slc6a1P31648 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Slc6a1P31648 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Slc6a1P31648 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Slc6a1P31648 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC10.36□□□□□ -0.75
Slc6a1P31648 Mir1982-201ENSMUST00000157368 74 ntBASIC10.36□□□□□ -0.75
Slc6a1P31648 Mir1938-201ENSMUST00000158746 100 ntBASIC10.36□□□□□ -0.75
Slc6a1P31648 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC10.36□□□□□ -0.75
Slc6a1P31648 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Slc6a1P31648 Gm8835-201ENSMUST00000173096 1169 ntBASIC10.36□□□□□ -0.75
Slc6a1P31648 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC10.36□□□□□ -0.75
Slc6a1P31648 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Slc6a1P31648 Gm9124-201ENSMUST00000191789 1092 ntBASIC10.36□□□□□ -0.75
Slc6a1P31648 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC10.36□□□□□ -0.75
Slc6a1P31648 Gm9113-201ENSMUST00000192510 1018 ntBASIC10.36□□□□□ -0.75
Slc6a1P31648 Gm9131-201ENSMUST00000193557 1089 ntBASIC10.36□□□□□ -0.75
Slc6a1P31648 Gm9121-201ENSMUST00000193749 1071 ntBASIC10.36□□□□□ -0.75
Slc6a1P31648 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC10.36□□□□□ -0.75
Slc6a1P31648 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.36□□□□□ -0.75
Slc6a1P31648 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.36□□□□□ -0.75
Slc6a1P31648 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC10.36□□□□□ -0.75
Slc6a1P31648 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Slc6a1P31648 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Slc6a1P31648 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Slc6a1P31648 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Slc6a1P31648 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Slc6a1P31648 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Slc6a1P31648 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC10.36□□□□□ -0.75
Slc6a1P31648 Gm9200-201ENSMUST00000118513 1354 ntBASIC10.36□□□□□ -0.75
Slc6a1P31648 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Slc6a1P31648 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.36□□□□□ -0.75
Slc6a1P31648 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Slc6a1P31648 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Slc6a1P31648 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Slc6a1P31648 Gm45206-201ENSMUST00000206885 2285 ntBASIC10.36□□□□□ -0.75
Slc6a1P31648 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Slc6a1P31648 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Slc6a1P31648 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Slc6a1P31648 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Slc6a1P31648 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Slc6a1P31648 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Slc6a1P31648 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Slc6a1P31648 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC10.35□□□□□ -0.75
Slc6a1P31648 Gm13050-201ENSMUST00000122149 1345 ntBASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms