Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Nedd8P29595 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nedd8P29595 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nedd8P29595 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Nedd8P29595 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nedd8P29595 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nedd8P29595 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nedd8P29595 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.06□□□□□ -0.64
Nedd8P29595 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nedd8P29595 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nedd8P29595 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Nedd8P29595 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nedd8P29595 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nedd8P29595 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Nedd8P29595 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nedd8P29595 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nedd8P29595 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.06□□□□□ -0.64
Nedd8P29595 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nedd8P29595 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nedd8P29595 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nedd8P29595 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nedd8P29595 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nedd8P29595 Gm5687-201ENSMUST00000118252 640 ntBASIC11.06□□□□□ -0.64
Nedd8P29595 Gm12036-201ENSMUST00000120008 530 ntBASIC11.06□□□□□ -0.64
Nedd8P29595 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.06□□□□□ -0.64
Nedd8P29595 Gm5264-201ENSMUST00000190584 848 ntBASIC11.06□□□□□ -0.64
Nedd8P29595 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC11.06□□□□□ -0.64
Nedd8P29595 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nedd8P29595 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Nedd8P29595 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nedd8P29595 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nedd8P29595 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Nedd8P29595 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nedd8P29595 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nedd8P29595 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nedd8P29595 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nedd8P29595 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Nedd8P29595 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nedd8P29595 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nedd8P29595 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Nedd8P29595 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nedd8P29595 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nedd8P29595 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nedd8P29595 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC11.06□□□□□ -0.64
Nedd8P29595 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nedd8P29595 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.06□□□□□ -0.64
Nedd8P29595 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nedd8P29595 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.06□□□□□ -0.64
Nedd8P29595 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.06□□□□□ -0.64
Nedd8P29595 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nedd8P29595 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.05□□□□□ -0.64
Nedd8P29595 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nedd8P29595 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nedd8P29595 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.05□□□□□ -0.64
Nedd8P29595 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nedd8P29595 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nedd8P29595 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Nedd8P29595 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nedd8P29595 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.05□□□□□ -0.64
Nedd8P29595 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nedd8P29595 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nedd8P29595 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nedd8P29595 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nedd8P29595 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nedd8P29595 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nedd8P29595 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nedd8P29595 Gm27243-201ENSMUST00000183964 521 ntBASIC11.05□□□□□ -0.64
Nedd8P29595 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.05□□□□□ -0.64
Nedd8P29595 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.05□□□□□ -0.64
Nedd8P29595 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.05□□□□□ -0.64
Nedd8P29595 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nedd8P29595 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Nedd8P29595 Gm9063-201ENSMUST00000223299 582 ntBASIC11.05□□□□□ -0.64
Nedd8P29595 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nedd8P29595 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nedd8P29595 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nedd8P29595 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Nedd8P29595 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nedd8P29595 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Nedd8P29595 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nedd8P29595 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nedd8P29595 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nedd8P29595 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Nedd8P29595 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC11.05□□□□□ -0.64
Nedd8P29595 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.05□□□□□ -0.64
Nedd8P29595 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nedd8P29595 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nedd8P29595 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nedd8P29595 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nedd8P29595 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nedd8P29595 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nedd8P29595 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nedd8P29595 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nedd8P29595 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Nedd8P29595 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nedd8P29595 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nedd8P29595 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nedd8P29595 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nedd8P29595 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nedd8P29595 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms