Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col2a1P28481 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC13.49□□□□□ -0.25
Col2a1P28481 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC13.49□□□□□ -0.25
Col2a1P28481 Gm7741-201ENSMUST00000181445 989 ntBASIC13.49□□□□□ -0.25
Col2a1P28481 Gm19015-201ENSMUST00000184002 1189 ntBASIC13.49□□□□□ -0.25
Col2a1P28481 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC13.49□□□□□ -0.25
Col2a1P28481 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC13.49□□□□□ -0.25
Col2a1P28481 Gm19009-201ENSMUST00000223072 823 ntBASIC13.49□□□□□ -0.25
Col2a1P28481 CT010506.1-201ENSMUST00000223673 349 ntBASIC13.49□□□□□ -0.25
Col2a1P28481 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col2a1P28481 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC13.49□□□□□ -0.25
Col2a1P28481 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Col2a1P28481 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col2a1P28481 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col2a1P28481 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.49□□□□□ -0.25
Col2a1P28481 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col2a1P28481 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col2a1P28481 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Col2a1P28481 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.49□□□□□ -0.25
Col2a1P28481 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
Col2a1P28481 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col2a1P28481 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col2a1P28481 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col2a1P28481 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Col2a1P28481 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Col2a1P28481 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col2a1P28481 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col2a1P28481 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC13.49□□□□□ -0.25
Col2a1P28481 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col2a1P28481 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Col2a1P28481 Gm12795-201ENSMUST00000117594 539 ntBASIC13.48□□□□□ -0.25
Col2a1P28481 Gm14071-201ENSMUST00000117817 509 ntBASIC13.48□□□□□ -0.25
Col2a1P28481 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col2a1P28481 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col2a1P28481 Gm6548-201ENSMUST00000167498 1165 ntBASIC13.48□□□□□ -0.25
Col2a1P28481 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC13.48□□□□□ -0.25
Col2a1P28481 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col2a1P28481 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col2a1P28481 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC13.48□□□□□ -0.25
Col2a1P28481 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC13.48□□□□□ -0.25
Col2a1P28481 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Col2a1P28481 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Col2a1P28481 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Col2a1P28481 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col2a1P28481 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC13.48□□□□□ -0.25
Col2a1P28481 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col2a1P28481 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col2a1P28481 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col2a1P28481 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Col2a1P28481 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Col2a1P28481 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col2a1P28481 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Col2a1P28481 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Col2a1P28481 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col2a1P28481 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col2a1P28481 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col2a1P28481 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.48□□□□□ -0.25
Col2a1P28481 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col2a1P28481 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col2a1P28481 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col2a1P28481 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col2a1P28481 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC13.48□□□□□ -0.25
Col2a1P28481 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col2a1P28481 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col2a1P28481 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col2a1P28481 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col2a1P28481 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.48□□□□□ -0.25
Col2a1P28481 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col2a1P28481 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col2a1P28481 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col2a1P28481 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col2a1P28481 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col2a1P28481 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col2a1P28481 Gm26013-201ENSMUST00000104404 119 ntBASIC13.48□□□□□ -0.25
Col2a1P28481 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col2a1P28481 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col2a1P28481 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC13.48□□□□□ -0.25
Col2a1P28481 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC13.48□□□□□ -0.25
Col2a1P28481 Gm25492-201ENSMUST00000157383 129 ntBASIC13.48□□□□□ -0.25
Col2a1P28481 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col2a1P28481 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col2a1P28481 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col2a1P28481 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col2a1P28481 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Col2a1P28481 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC13.48□□□□□ -0.25
Col2a1P28481 AC122346.3-201ENSMUST00000223983 306 ntBASIC13.48□□□□□ -0.25
Col2a1P28481 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col2a1P28481 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Col2a1P28481 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.48□□□□□ -0.25
Col2a1P28481 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col2a1P28481 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Col2a1P28481 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.47□□□□□ -0.25
Col2a1P28481 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col2a1P28481 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col2a1P28481 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col2a1P28481 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col2a1P28481 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col2a1P28481 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.47□□□□□ -0.25
Col2a1P28481 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col2a1P28481 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms