Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Pde6bP23440 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Pde6bP23440 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6bP23440 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Pde6bP23440 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6bP23440 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6bP23440 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6bP23440 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6bP23440 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6bP23440 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6bP23440 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6bP23440 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6bP23440 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.2□□□□□ -0.3
Pde6bP23440 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.2□□□□□ -0.3
Pde6bP23440 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6bP23440 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Pde6bP23440 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.2□□□□□ -0.3
Pde6bP23440 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6bP23440 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6bP23440 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6bP23440 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6bP23440 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.19□□□□□ -0.3
Pde6bP23440 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6bP23440 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Pde6bP23440 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6bP23440 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6bP23440 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6bP23440 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6bP23440 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6bP23440 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Pde6bP23440 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6bP23440 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6bP23440 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Pde6bP23440 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6bP23440 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6bP23440 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6bP23440 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC13.19□□□□□ -0.3
Pde6bP23440 Gm13045-201ENSMUST00000119019 712 ntBASIC13.19□□□□□ -0.3
Pde6bP23440 Gm15131-201ENSMUST00000119124 595 ntBASIC13.19□□□□□ -0.3
Pde6bP23440 Gm12196-201ENSMUST00000120954 262 ntBASIC13.19□□□□□ -0.3
Pde6bP23440 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC13.19□□□□□ -0.3
Pde6bP23440 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6bP23440 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6bP23440 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6bP23440 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6bP23440 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC13.19□□□□□ -0.3
Pde6bP23440 Gm43184-201ENSMUST00000197247 542 ntBASIC13.19□□□□□ -0.3
Pde6bP23440 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6bP23440 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6bP23440 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Pde6bP23440 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC13.19□□□□□ -0.3
Pde6bP23440 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6bP23440 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC13.19□□□□□ -0.3
Pde6bP23440 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6bP23440 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
Pde6bP23440 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.19□□□□□ -0.3
Pde6bP23440 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6bP23440 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6bP23440 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6bP23440 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.19□□□□□ -0.3
Pde6bP23440 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6bP23440 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6bP23440 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6bP23440 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6bP23440 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6bP23440 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6bP23440 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6bP23440 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6bP23440 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.19□□□□□ -0.3
Pde6bP23440 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6bP23440 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6bP23440 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6bP23440 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.18□□□□□ -0.3
Pde6bP23440 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6bP23440 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6bP23440 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6bP23440 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pde6bP23440 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6bP23440 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6bP23440 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6bP23440 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6bP23440 Gm23596-201ENSMUST00000104304 132 ntBASIC13.18□□□□□ -0.3
Pde6bP23440 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6bP23440 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6bP23440 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6bP23440 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6bP23440 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6bP23440 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6bP23440 Gm45770-201ENSMUST00000212105 616 ntBASIC13.18□□□□□ -0.3
Pde6bP23440 CT571245.2-201ENSMUST00000218421 305 ntBASIC13.18□□□□□ -0.3
Pde6bP23440 Gm1821-202ENSMUST00000227415 750 ntBASIC13.18□□□□□ -0.3
Pde6bP23440 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6bP23440 Gm26448-201ENSMUST00000082446 203 ntBASIC13.18□□□□□ -0.3
Pde6bP23440 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Pde6bP23440 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6bP23440 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6bP23440 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6bP23440 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6bP23440 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6bP23440 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms