Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
BdnfP21237 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
BdnfP21237 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
BdnfP21237 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
BdnfP21237 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
BdnfP21237 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
BdnfP21237 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
BdnfP21237 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
BdnfP21237 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.59□□□□□ -0.55
BdnfP21237 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
BdnfP21237 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
BdnfP21237 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
BdnfP21237 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
BdnfP21237 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
BdnfP21237 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.58□□□□□ -0.55
BdnfP21237 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
BdnfP21237 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
BdnfP21237 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.58□□□□□ -0.55
BdnfP21237 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
BdnfP21237 Phc1-203ENSMUST00000112600 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
BdnfP21237 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
BdnfP21237 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
BdnfP21237 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
BdnfP21237 Gm37593-201ENSMUST00000191669 3254 ntBASIC11.58□□□□□ -0.56
BdnfP21237 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
BdnfP21237 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
BdnfP21237 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
BdnfP21237 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.58□□□□□ -0.56
BdnfP21237 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
BdnfP21237 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
BdnfP21237 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
BdnfP21237 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
BdnfP21237 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
BdnfP21237 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
BdnfP21237 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.58□□□□□ -0.56
BdnfP21237 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
BdnfP21237 Gm8018-201ENSMUST00000173536 789 ntBASIC11.58□□□□□ -0.56
BdnfP21237 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
BdnfP21237 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.58□□□□□ -0.56
BdnfP21237 Gm6007-201ENSMUST00000208170 823 ntBASIC11.58□□□□□ -0.56
BdnfP21237 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
BdnfP21237 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.58□□□□□ -0.56
BdnfP21237 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.58□□□□□ -0.56
BdnfP21237 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.58□□□□□ -0.56
BdnfP21237 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.58□□□□□ -0.56
BdnfP21237 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
BdnfP21237 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
BdnfP21237 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
BdnfP21237 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
BdnfP21237 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.58□□□□□ -0.56
BdnfP21237 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
BdnfP21237 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
BdnfP21237 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.58□□□□□ -0.56
BdnfP21237 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
BdnfP21237 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.58□□□□□ -0.56
BdnfP21237 Duxbl1-201ENSMUST00000049793 2266 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
BdnfP21237 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
BdnfP21237 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
BdnfP21237 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
BdnfP21237 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
BdnfP21237 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
BdnfP21237 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
BdnfP21237 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.58□□□□□ -0.56
BdnfP21237 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
BdnfP21237 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
BdnfP21237 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
BdnfP21237 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
BdnfP21237 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
BdnfP21237 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
BdnfP21237 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
BdnfP21237 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
BdnfP21237 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.57□□□□□ -0.56
BdnfP21237 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
BdnfP21237 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
BdnfP21237 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
BdnfP21237 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
BdnfP21237 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
BdnfP21237 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
BdnfP21237 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.57□□□□□ -0.56
BdnfP21237 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
BdnfP21237 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
BdnfP21237 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
BdnfP21237 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.57□□□□□ -0.56
BdnfP21237 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
BdnfP21237 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.57□□□□□ -0.56
BdnfP21237 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
BdnfP21237 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
BdnfP21237 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.57□□□□□ -0.56
BdnfP21237 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.57□□□□□ -0.56
BdnfP21237 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.57□□□□□ -0.56
BdnfP21237 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
BdnfP21237 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
BdnfP21237 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.57□□□□□ -0.56
BdnfP21237 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
BdnfP21237 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
BdnfP21237 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
BdnfP21237 Snora73a-201ENSMUST00000082453 205 ntBASIC11.57□□□□□ -0.56
BdnfP21237 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
BdnfP21237 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
BdnfP21237 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms