Protein–RNA interactions for Protein: P20615

Hoxb9, Homeobox protein Hox-B9, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb9P20615 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.52□□□□□ -0.57
Hoxb9P20615 Gm44967-201ENSMUST00000207047 631 ntBASIC11.52□□□□□ -0.57
Hoxb9P20615 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.52□□□□□ -0.57
Hoxb9P20615 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb9P20615 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.52□□□□□ -0.57
Hoxb9P20615 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Hoxb9P20615 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Hoxb9P20615 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb9P20615 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.52□□□□□ -0.57
Hoxb9P20615 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb9P20615 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Hoxb9P20615 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb9P20615 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb9P20615 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb9P20615 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb9P20615 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb9P20615 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb9P20615 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb9P20615 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.52□□□□□ -0.57
Hoxb9P20615 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb9P20615 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb9P20615 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb9P20615 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb9P20615 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Hoxb9P20615 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb9P20615 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.51□□□□□ -0.57
Hoxb9P20615 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb9P20615 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb9P20615 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb9P20615 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb9P20615 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb9P20615 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb9P20615 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.51□□□□□ -0.57
Hoxb9P20615 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb9P20615 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb9P20615 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb9P20615 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb9P20615 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb9P20615 Gm11511-201ENSMUST00000118146 540 ntBASIC11.51□□□□□ -0.57
Hoxb9P20615 Gm13665-201ENSMUST00000120830 528 ntBASIC11.51□□□□□ -0.57
Hoxb9P20615 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.51□□□□□ -0.57
Hoxb9P20615 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.51□□□□□ -0.57
Hoxb9P20615 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.51□□□□□ -0.57
Hoxb9P20615 Gm44651-201ENSMUST00000207343 372 ntBASIC11.51□□□□□ -0.57
Hoxb9P20615 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.51□□□□□ -0.57
Hoxb9P20615 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.51□□□□□ -0.57
Hoxb9P20615 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb9P20615 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb9P20615 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb9P20615 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb9P20615 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb9P20615 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.51□□□□□ -0.57
Hoxb9P20615 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb9P20615 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb9P20615 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb9P20615 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb9P20615 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Hoxb9P20615 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb9P20615 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb9P20615 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb9P20615 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb9P20615 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb9P20615 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
Hoxb9P20615 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxb9P20615 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Hoxb9P20615 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Hoxb9P20615 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxb9P20615 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxb9P20615 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxb9P20615 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxb9P20615 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxb9P20615 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxb9P20615 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxb9P20615 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxb9P20615 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxb9P20615 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Hoxb9P20615 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Hoxb9P20615 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxb9P20615 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.5□□□□□ -0.57
Hoxb9P20615 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxb9P20615 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Hoxb9P20615 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Hoxb9P20615 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxb9P20615 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxb9P20615 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.5□□□□□ -0.57
Hoxb9P20615 Gm26286-201ENSMUST00000104166 134 ntBASIC11.5□□□□□ -0.57
Hoxb9P20615 Gm13296-201ENSMUST00000117854 997 ntBASIC11.5□□□□□ -0.57
Hoxb9P20615 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxb9P20615 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.5□□□□□ -0.57
Hoxb9P20615 Gm5616-201ENSMUST00000165252 384 ntBASIC11.5□□□□□ -0.57
Hoxb9P20615 Gm8741-201ENSMUST00000174736 384 ntBASIC11.5□□□□□ -0.57
Hoxb9P20615 Gm25890-201ENSMUST00000177643 165 ntBASIC11.5□□□□□ -0.57
Hoxb9P20615 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.5□□□□□ -0.57
Hoxb9P20615 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.5□□□□□ -0.57
Hoxb9P20615 Gm22614-201ENSMUST00000178300 165 ntBASIC11.5□□□□□ -0.57
Hoxb9P20615 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.5□□□□□ -0.57
Hoxb9P20615 Gm8956-201ENSMUST00000203939 825 ntBASIC11.5□□□□□ -0.57
Hoxb9P20615 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.5□□□□□ -0.57
Hoxb9P20615 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxb9P20615 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms