Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Gm9089-201ENSMUST00000122027 526 ntBASIC11.25□□□□□ -0.61
Sod1P08228 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC11.25□□□□□ -0.61
Sod1P08228 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sod1P08228 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Sod1P08228 Rn7s6-201ENSMUST00000175005 291 ntBASIC11.25□□□□□ -0.61
Sod1P08228 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sod1P08228 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sod1P08228 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sod1P08228 Gm3671-201ENSMUST00000182463 1007 ntBASIC11.25□□□□□ -0.61
Sod1P08228 Gm5100-201ENSMUST00000195631 589 ntBASIC11.25□□□□□ -0.61
Sod1P08228 Gm5982-201ENSMUST00000196234 512 ntBASIC11.25□□□□□ -0.61
Sod1P08228 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC11.25□□□□□ -0.61
Sod1P08228 Gm45594-201ENSMUST00000211717 241 ntBASIC11.25□□□□□ -0.61
Sod1P08228 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sod1P08228 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Sod1P08228 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sod1P08228 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sod1P08228 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sod1P08228 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sod1P08228 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Sod1P08228 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sod1P08228 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sod1P08228 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sod1P08228 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sod1P08228 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sod1P08228 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Sod1P08228 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sod1P08228 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sod1P08228 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sod1P08228 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Sod1P08228 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Sod1P08228 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Sod1P08228 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Sod1P08228 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Sod1P08228 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sod1P08228 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sod1P08228 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Sod1P08228 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.24□□□□□ -0.61
Sod1P08228 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sod1P08228 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sod1P08228 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sod1P08228 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sod1P08228 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Sod1P08228 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.24□□□□□ -0.61
Sod1P08228 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sod1P08228 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sod1P08228 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sod1P08228 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sod1P08228 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sod1P08228 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
Sod1P08228 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sod1P08228 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.24□□□□□ -0.61
Sod1P08228 Gm11244-201ENSMUST00000121243 237 ntBASIC11.24□□□□□ -0.61
Sod1P08228 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC11.24□□□□□ -0.61
Sod1P08228 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sod1P08228 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sod1P08228 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sod1P08228 Mir8093-201ENSMUST00000185043 137 ntBASIC11.24□□□□□ -0.61
Sod1P08228 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC11.24□□□□□ -0.61
Sod1P08228 Gm19091-201ENSMUST00000208120 978 ntBASIC11.24□□□□□ -0.61
Sod1P08228 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.24□□□□□ -0.61
Sod1P08228 Gm23680-201ENSMUST00000083162 164 ntBASIC11.24□□□□□ -0.61
Sod1P08228 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sod1P08228 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sod1P08228 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.24□□□□□ -0.61
Sod1P08228 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sod1P08228 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.24□□□□□ -0.61
Sod1P08228 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sod1P08228 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Sod1P08228 Gm3765-201ENSMUST00000130985 1447 ntBASIC11.24□□□□□ -0.61
Sod1P08228 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.24□□□□□ -0.61
Sod1P08228 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sod1P08228 Gm37859-201ENSMUST00000195529 2173 ntBASIC11.24□□□□□ -0.61
Sod1P08228 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
Sod1P08228 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sod1P08228 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sod1P08228 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sod1P08228 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sod1P08228 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sod1P08228 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Sod1P08228 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Sod1P08228 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sod1P08228 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sod1P08228 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sod1P08228 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sod1P08228 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sod1P08228 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Sod1P08228 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Sod1P08228 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Sod1P08228 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sod1P08228 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sod1P08228 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.23□□□□□ -0.61
Sod1P08228 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Sod1P08228 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Sod1P08228 Gm15615-201ENSMUST00000118876 198 ntBASIC11.23□□□□□ -0.61
Sod1P08228 n-R5s84-201ENSMUST00000122591 109 ntBASIC11.23□□□□□ -0.61
Sod1P08228 Gm24398-201ENSMUST00000157870 109 ntBASIC11.23□□□□□ -0.61
Sod1P08228 Gm15744-201ENSMUST00000161734 213 ntBASIC11.23□□□□□ -0.61
Sod1P08228 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sod1P08228 Gm6771-201ENSMUST00000182716 1001 ntBASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms