Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptch2O35595 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptch2O35595 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptch2O35595 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ptch2O35595 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Ptch2O35595 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ptch2O35595 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.36□□□□□ -0.43
Ptch2O35595 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ptch2O35595 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ptch2O35595 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ptch2O35595 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ptch2O35595 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ptch2O35595 Gm44999-201ENSMUST00000207456 1493 ntBASIC12.36□□□□□ -0.43
Ptch2O35595 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ptch2O35595 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ptch2O35595 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ptch2O35595 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC12.36□□□□□ -0.43
Ptch2O35595 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.36□□□□□ -0.43
Ptch2O35595 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.36□□□□□ -0.43
Ptch2O35595 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Ptch2O35595 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ptch2O35595 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.36□□□□□ -0.43
Ptch2O35595 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ptch2O35595 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Ptch2O35595 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC12.36□□□□□ -0.43
Ptch2O35595 Gm9797-202ENSMUST00000218003 294 ntBASIC12.36□□□□□ -0.43
Ptch2O35595 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC12.36□□□□□ -0.43
Ptch2O35595 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.36□□□□□ -0.43
Ptch2O35595 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Ptch2O35595 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ptch2O35595 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ptch2O35595 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ptch2O35595 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ptch2O35595 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ptch2O35595 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ptch2O35595 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ptch2O35595 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.36□□□□□ -0.43
Ptch2O35595 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ptch2O35595 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ptch2O35595 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ptch2O35595 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ptch2O35595 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.36□□□□□ -0.43
Ptch2O35595 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ptch2O35595 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Ptch2O35595 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ptch2O35595 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ptch2O35595 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.35□□□□□ -0.43
Ptch2O35595 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ptch2O35595 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.35□□□□□ -0.43
Ptch2O35595 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ptch2O35595 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC12.35□□□□□ -0.43
Ptch2O35595 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ptch2O35595 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ptch2O35595 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ptch2O35595 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ptch2O35595 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ptch2O35595 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.35□□□□□ -0.43
Ptch2O35595 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ptch2O35595 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ptch2O35595 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ptch2O35595 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.35□□□□□ -0.43
Ptch2O35595 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.35□□□□□ -0.43
Ptch2O35595 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ptch2O35595 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Ptch2O35595 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ptch2O35595 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Ptch2O35595 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ptch2O35595 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ptch2O35595 Gm8100-201ENSMUST00000182906 988 ntBASIC12.35□□□□□ -0.43
Ptch2O35595 Gm27438-201ENSMUST00000183480 110 ntBASIC12.35□□□□□ -0.43
Ptch2O35595 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.35□□□□□ -0.43
Ptch2O35595 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.35□□□□□ -0.43
Ptch2O35595 Gm44545-201ENSMUST00000208262 746 ntBASIC12.35□□□□□ -0.43
Ptch2O35595 Gm44551-201ENSMUST00000208804 171 ntBASIC12.35□□□□□ -0.43
Ptch2O35595 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.35□□□□□ -0.43
Ptch2O35595 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.35□□□□□ -0.43
Ptch2O35595 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ptch2O35595 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.35□□□□□ -0.43
Ptch2O35595 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ptch2O35595 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Ptch2O35595 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ptch2O35595 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ptch2O35595 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ptch2O35595 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ptch2O35595 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ptch2O35595 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ptch2O35595 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ptch2O35595 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ptch2O35595 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.35□□□□□ -0.43
Ptch2O35595 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ptch2O35595 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ptch2O35595 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.35□□□□□ -0.43
Ptch2O35595 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.35□□□□□ -0.43
Ptch2O35595 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ptch2O35595 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ptch2O35595 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ptch2O35595 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.34□□□□□ -0.43
Ptch2O35595 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ptch2O35595 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.34□□□□□ -0.43
Ptch2O35595 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms