Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdh1F7BJK1 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdh1F7BJK1 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdh1F7BJK1 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdh1F7BJK1 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.85□□□□□ -0.67
Pcdh1F7BJK1 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdh1F7BJK1 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdh1F7BJK1 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdh1F7BJK1 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdh1F7BJK1 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdh1F7BJK1 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdh1F7BJK1 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Pcdh1F7BJK1 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdh1F7BJK1 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Pcdh1F7BJK1 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh1F7BJK1 Gm7553-201ENSMUST00000185805 1426 ntBASIC10.84□□□□□ -0.67
Pcdh1F7BJK1 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Pcdh1F7BJK1 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh1F7BJK1 Gm17230-201ENSMUST00000171194 3942 ntBASIC10.84□□□□□ -0.67
Pcdh1F7BJK1 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh1F7BJK1 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh1F7BJK1 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh1F7BJK1 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.84□□□□□ -0.67
Pcdh1F7BJK1 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh1F7BJK1 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh1F7BJK1 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh1F7BJK1 Gm11591-201ENSMUST00000120063 702 ntBASIC10.84□□□□□ -0.67
Pcdh1F7BJK1 Gm16177-201ENSMUST00000120728 718 ntBASIC10.84□□□□□ -0.67
Pcdh1F7BJK1 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC10.84□□□□□ -0.67
Pcdh1F7BJK1 Gm8738-201ENSMUST00000172606 329 ntBASIC10.84□□□□□ -0.67
Pcdh1F7BJK1 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh1F7BJK1 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh1F7BJK1 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh1F7BJK1 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh1F7BJK1 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Pcdh1F7BJK1 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.84□□□□□ -0.67
Pcdh1F7BJK1 Gm43818-201ENSMUST00000200605 466 ntBASIC10.84□□□□□ -0.67
Pcdh1F7BJK1 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC10.84□□□□□ -0.67
Pcdh1F7BJK1 Gm5904-201ENSMUST00000210286 865 ntBASIC10.84□□□□□ -0.67
Pcdh1F7BJK1 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.84□□□□□ -0.67
Pcdh1F7BJK1 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh1F7BJK1 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh1F7BJK1 Gm18782-201ENSMUST00000209023 1399 ntBASIC10.84□□□□□ -0.67
Pcdh1F7BJK1 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Pcdh1F7BJK1 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh1F7BJK1 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC10.84□□□□□ -0.67
Pcdh1F7BJK1 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh1F7BJK1 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Pcdh1F7BJK1 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh1F7BJK1 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh1F7BJK1 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh1F7BJK1 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh1F7BJK1 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh1F7BJK1 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh1F7BJK1 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh1F7BJK1 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Pcdh1F7BJK1 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Pcdh1F7BJK1 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh1F7BJK1 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh1F7BJK1 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Pcdh1F7BJK1 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh1F7BJK1 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh1F7BJK1 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh1F7BJK1 Gm43963-201ENSMUST00000203466 2488 ntBASIC10.83□□□□□ -0.68
Pcdh1F7BJK1 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Pcdh1F7BJK1 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Pcdh1F7BJK1 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh1F7BJK1 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh1F7BJK1 Gm37131-201ENSMUST00000192502 1561 ntBASIC10.83□□□□□ -0.68
Pcdh1F7BJK1 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.83□□□□□ -0.68
Pcdh1F7BJK1 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh1F7BJK1 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh1F7BJK1 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC10.83□□□□□ -0.68
Pcdh1F7BJK1 Gm15824-201ENSMUST00000119516 955 ntBASIC10.83□□□□□ -0.68
Pcdh1F7BJK1 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC10.83□□□□□ -0.68
Pcdh1F7BJK1 Gm17150-201ENSMUST00000165577 381 ntBASIC10.83□□□□□ -0.68
Pcdh1F7BJK1 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Pcdh1F7BJK1 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.83□□□□□ -0.68
Pcdh1F7BJK1 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh1F7BJK1 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Pcdh1F7BJK1 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Pcdh1F7BJK1 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh1F7BJK1 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh1F7BJK1 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh1F7BJK1 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh1F7BJK1 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh1F7BJK1 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh1F7BJK1 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh1F7BJK1 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh1F7BJK1 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh1F7BJK1 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Pcdh1F7BJK1 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh1F7BJK1 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Pcdh1F7BJK1 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh1F7BJK1 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Pcdh1F7BJK1 Gm5620-201ENSMUST00000077991 1348 ntBASIC10.83□□□□□ -0.68
Pcdh1F7BJK1 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdh1F7BJK1 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdh1F7BJK1 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms