Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC10.18□□□□□ -0.78
Cpsf4lE9Q2N0 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cpsf4lE9Q2N0 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cpsf4lE9Q2N0 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.18□□□□□ -0.78
Cpsf4lE9Q2N0 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cpsf4lE9Q2N0 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.18□□□□□ -0.78
Cpsf4lE9Q2N0 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cpsf4lE9Q2N0 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cpsf4lE9Q2N0 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cpsf4lE9Q2N0 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Cpsf4lE9Q2N0 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cpsf4lE9Q2N0 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cpsf4lE9Q2N0 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Cpsf4lE9Q2N0 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cpsf4lE9Q2N0 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cpsf4lE9Q2N0 Gm18983-201ENSMUST00000222884 2729 ntBASIC10.18□□□□□ -0.78
Cpsf4lE9Q2N0 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cpsf4lE9Q2N0 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cpsf4lE9Q2N0 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cpsf4lE9Q2N0 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 Gm18263-201ENSMUST00000220846 1928 ntBASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 Gm22133-201ENSMUST00000102082 109 ntBASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 Gm15808-201ENSMUST00000119046 604 ntBASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 Gm8956-201ENSMUST00000203939 825 ntBASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 Gm45433-201ENSMUST00000209386 247 ntBASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cpsf4lE9Q2N0 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Pck2-205ENSMUST00000226352 2784 ntBASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Gm26286-201ENSMUST00000104166 134 ntBASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Gm24749-201ENSMUST00000157838 343 ntBASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Gm27627-201ENSMUST00000183644 150 ntBASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Gm29615-201ENSMUST00000185371 697 ntBASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Gm28224-201ENSMUST00000186078 697 ntBASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Gm29001-201ENSMUST00000186177 697 ntBASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Gm28292-201ENSMUST00000186593 697 ntBASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Gm28101-201ENSMUST00000187608 697 ntBASIC10.16□□□□□ -0.78
Cpsf4lE9Q2N0 Gm29076-201ENSMUST00000187689 697 ntBASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms