Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Srp54bE9PXC0 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54bE9PXC0 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54bE9PXC0 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54bE9PXC0 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54bE9PXC0 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54bE9PXC0 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54bE9PXC0 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54bE9PXC0 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Srp54bE9PXC0 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54bE9PXC0 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Srp54bE9PXC0 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
Srp54bE9PXC0 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54bE9PXC0 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54bE9PXC0 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Srp54bE9PXC0 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54bE9PXC0 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54bE9PXC0 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC11.9□□□□□ -0.5
Srp54bE9PXC0 Gm8566-201ENSMUST00000120174 465 ntBASIC11.9□□□□□ -0.5
Srp54bE9PXC0 Gm14247-201ENSMUST00000120950 237 ntBASIC11.9□□□□□ -0.5
Srp54bE9PXC0 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.9□□□□□ -0.5
Srp54bE9PXC0 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.9□□□□□ -0.5
Srp54bE9PXC0 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54bE9PXC0 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54bE9PXC0 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54bE9PXC0 Gm7467-201ENSMUST00000185173 652 ntBASIC11.9□□□□□ -0.5
Srp54bE9PXC0 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54bE9PXC0 Gm37835-201ENSMUST00000193305 361 ntBASIC11.9□□□□□ -0.5
Srp54bE9PXC0 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.9□□□□□ -0.5
Srp54bE9PXC0 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.9□□□□□ -0.5
Srp54bE9PXC0 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Srp54bE9PXC0 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54bE9PXC0 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54bE9PXC0 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.9□□□□□ -0.5
Srp54bE9PXC0 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54bE9PXC0 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54bE9PXC0 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Srp54bE9PXC0 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54bE9PXC0 Ginm1-202ENSMUST00000065124 300 ntBASIC11.9□□□□□ -0.5
Srp54bE9PXC0 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54bE9PXC0 Gm5705-201ENSMUST00000066241 711 ntBASIC11.9□□□□□ -0.5
Srp54bE9PXC0 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54bE9PXC0 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54bE9PXC0 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.9□□□□□ -0.5
Srp54bE9PXC0 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.9□□□□□ -0.5
Srp54bE9PXC0 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54bE9PXC0 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.9□□□□□ -0.5
Srp54bE9PXC0 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54bE9PXC0 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.9□□□□□ -0.5
Srp54bE9PXC0 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54bE9PXC0 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Srp54bE9PXC0 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Srp54bE9PXC0 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54bE9PXC0 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54bE9PXC0 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.89□□□□□ -0.51
Srp54bE9PXC0 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54bE9PXC0 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54bE9PXC0 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.89□□□□□ -0.51
Srp54bE9PXC0 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.89□□□□□ -0.51
Srp54bE9PXC0 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.89□□□□□ -0.51
Srp54bE9PXC0 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54bE9PXC0 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54bE9PXC0 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54bE9PXC0 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54bE9PXC0 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54bE9PXC0 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54bE9PXC0 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.89□□□□□ -0.51
Srp54bE9PXC0 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54bE9PXC0 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.89□□□□□ -0.51
Srp54bE9PXC0 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Srp54bE9PXC0 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54bE9PXC0 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.89□□□□□ -0.51
Srp54bE9PXC0 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54bE9PXC0 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.89□□□□□ -0.51
Srp54bE9PXC0 Gm15131-201ENSMUST00000119124 595 ntBASIC11.89□□□□□ -0.51
Srp54bE9PXC0 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.89□□□□□ -0.51
Srp54bE9PXC0 Gm27530-201ENSMUST00000184096 98 ntBASIC11.89□□□□□ -0.51
Srp54bE9PXC0 Gm4034-201ENSMUST00000187674 480 ntBASIC11.89□□□□□ -0.51
Srp54bE9PXC0 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.89□□□□□ -0.51
Srp54bE9PXC0 AC125486.1-201ENSMUST00000218701 320 ntBASIC11.89□□□□□ -0.51
Srp54bE9PXC0 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.89□□□□□ -0.51
Srp54bE9PXC0 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54bE9PXC0 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54bE9PXC0 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54bE9PXC0 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.89□□□□□ -0.51
Srp54bE9PXC0 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54bE9PXC0 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Srp54bE9PXC0 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.89□□□□□ -0.51
Srp54bE9PXC0 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Srp54bE9PXC0 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54bE9PXC0 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54bE9PXC0 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Srp54bE9PXC0 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54bE9PXC0 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54bE9PXC0 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54bE9PXC0 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54bE9PXC0 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54bE9PXC0 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54bE9PXC0 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.89□□□□□ -0.51
Srp54bE9PXC0 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms